Detailed information of Clavulariidae_g6 in Trachythela sp. YZ-2020 Gene info
Gene IDAnnotationContigStartEndStrand
Clavulariidae_g6SUPERKILLER 3 PROTEIN-RELATEDctg00000180954138184-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00053Laminin_EGFLaminin EGF domainDomainInterproscan
PF00054Laminin_G_1Laminin G domainDomainInterproscan
PF00168C2C2 domainDomainInterproscan
PF01476LysMLysM domainDomainInterproscan
PF02210Laminin_G_2Laminin G domainDomainInterproscan
PF13432TPR_16Tetratricopeptide repeatRepeatInterproscan
PF14559TPR_19Tetratricopeptide repeatRepeatInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000008DomainC2 domainInterproscan
IPR000742DomainEGF-like domainInterproscan
IPR001791DomainLaminin G domainInterproscan
IPR002049DomainLaminin-type EGF domainInterproscan
IPR008211DomainLaminin, N-terminalInterproscan
IPR008979Homologous_superfamilyGalactose-binding-like domain superfamilyInterproscan
IPR011990Homologous_superfamilyTetratricopeptide-like helical domain superfamilyInterproscan
IPR013320Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan
IPR018392DomainLysM domainInterproscan
IPR019734RepeatTetratricopeptide repeatInterproscan
IPR035892Homologous_superfamilyC2 domain superfamilyInterproscan
IPR036779Homologous_superfamilyLysM domain superfamilyInterproscan
IPR039226FamilySki3/TTC37Interproscan

PANTHER
PANTHER termDescriptionSource
PTHR15704SUPERKILLER 3 PROTEIN-RELATEDInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0006401Biological ProcessRNA catabolic processInterproscan
GO:0034427Biological Processobsolete nuclear-transcribed mRNA catabolic process, exonucleolytic, 3'-5'Interproscan
GO:0055087Cellular ComponentSki complexInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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