Detailed information of Clavulariidae_g2472 in Trachythela sp. YZ-2020 Gene info
Gene IDAnnotationContigStartEndStrand
Clavulariidae_g2472TRNA PSEUDOURIDINE SYNTHASE Dctg00005236361143645411-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00024PAN_1PAN domainDomainInterproscan
PF00147Fibrinogen_CFibrinogen beta and gamma chains, C-terminal globular domainDomainInterproscan
PF01142TruDtRNA pseudouridine synthase D (TruD)FamilyInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR001656FamilyPseudouridine synthase, TruDInterproscan
IPR002181DomainFibrinogen, alpha/beta/gamma chain, C-terminal globular domainInterproscan
IPR003609DomainPAN/Apple domainInterproscan
IPR011760DomainPseudouridine synthase, TruD, insertion domainInterproscan
IPR014716Homologous_superfamilyFibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 1Interproscan
IPR020103Homologous_superfamilyPseudouridine synthase, catalytic domain superfamilyInterproscan
IPR020837Conserved_siteFibrinogen, conserved siteInterproscan
IPR036056Homologous_superfamilyFibrinogen-like, C-terminalInterproscan
IPR042214Homologous_superfamilyPseudouridine synthase, TruD, catalytic domainInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR13326TRNA PSEUDOURIDINE SYNTHASE DInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0001522Biological Processpseudouridine synthesisInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0009451Biological ProcessRNA modificationInterproscan
GO:0009982Molecular Functionpseudouridine synthase activityInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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