Detailed information of Clavulariidae_g23534 in Trachythela sp. YZ-2020 Gene info
Gene IDAnnotationContigStartEndStrand
Clavulariidae_g23534NUCLEOPORINctg0005391104413111099527+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
--

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF03372Exo_endo_phosEndonuclease/Exonuclease/phosphatase familyDomainInterproscan
PF04096Nucleoporin2Nucleoporin autopeptidaseFamilyInterproscan
PF12110Nup96Nuclear protein 96DomainInterproscan
PF21240Nup98_GLEBSNup98, Gle2-binding sequenceDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000477DomainReverse transcriptase domainInterproscan
IPR005135DomainEndonuclease/exonuclease/phosphataseInterproscan
IPR007230DomainNuclear pore complex protein Nup98-Nup96-like, autopeptidase S59 domainInterproscan
IPR021967DomainNuclear pore complex protein NUP96, C-terminal domainInterproscan
IPR036691Homologous_superfamilyEndonuclease/exonuclease/phosphatase superfamilyInterproscan
IPR036903Homologous_superfamilyNuclear pore complex protein Nup98-Nup96-like, autopeptidase S59 domain superfamilyInterproscan
IPR037665FamilyNucleoporin peptidase S59-likeInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR23198NUCLEOPORINInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000973Biological Processpost-transcriptional tethering of RNA polymerase II gene DNA at nuclear peripheryInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0003824Molecular Functioncatalytic activityInterproscan
GO:0005643Cellular Componentnuclear poreInterproscan
GO:0006405Biological ProcessRNA export from nucleusInterproscan
GO:0006606Biological Processprotein import into nucleusInterproscan
GO:0006913Biological Processnucleocytoplasmic transportInterproscan
GO:0008139Molecular Functionnuclear localization sequence bindingInterproscan
GO:0017056Molecular Functionstructural constituent of nuclear poreInterproscan
GO:0034398Biological Processtelomere tethering at nuclear peripheryInterproscan
GO:0044614Cellular Componentnuclear pore cytoplasmic filamentsInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
------

TOP