Detailed information of Clavulariidae_g22109 in Trachythela sp. YZ-2020 Gene info
Gene IDAnnotationContigStartEndStrand
Clavulariidae_g22109RIBOSOMAL PROTEIN L47, MITOCHONDRIAL-RELATEDctg00051074353287447402-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
--

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01391CollagenCollagen triple helix repeat (20 copies)RepeatInterproscan
PF03874RNA_pol_Rpb4RNA polymerase Rpb4FamilyInterproscan
PF06984MRP-L47Mitochondrial 39-S ribosomal protein L47 (MRP-L47)FamilyInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR005574FamilyRNA polymerase subunit Rpb4/RPC9Interproscan
IPR006590DomainRNA polymerase Rpb4/RPC9, coreInterproscan
IPR008160RepeatCollagen triple helix repeatInterproscan
IPR010729FamilyLarge ribosomal subunit protein uL29m, mitochondrialInterproscan
IPR010997Homologous_superfamilyHRDC-like superfamilyInterproscan
IPR036049Homologous_superfamilyLarge ribosomal subunit protein uL29 superfamilyInterproscan
IPR038324Homologous_superfamilyRpb4/RPC9 superfamilyInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR21183RIBOSOMAL PROTEIN L47, MITOCHONDRIAL-RELATEDInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000166Molecular Functionnucleotide bindingInterproscan
GO:0003735Molecular Functionstructural constituent of ribosomeInterproscan
GO:0005761Cellular Componentmitochondrial ribosomeInterproscan
GO:0005762Cellular Componentmitochondrial large ribosomal subunitInterproscan
GO:0005840Cellular ComponentribosomeInterproscan
GO:0006352Biological ProcessDNA-templated transcription initiationInterproscan
GO:0006412Biological ProcesstranslationInterproscan
GO:0030880Cellular ComponentRNA polymerase complexInterproscan
GO:0032543Biological Processmitochondrial translationInterproscan
GO:0044237Biological Processobsolete cellular metabolic processInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
------

TOP