Detailed information of Clavulariidae_g21480 in Trachythela sp. YZ-2020 Gene info
Gene IDAnnotationContigStartEndStrand
Clavulariidae_g21480INTEGRIN ALPHActg00049924270762482986+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01301Glyco_hydro_35Glycosyl hydrolases family 35DomainInterproscan
PF01839FG-GAPFG-GAP repeatRepeatInterproscan
PF08441Integrin_A_Ig_1Integrin alpha Ig-like domain 1DomainInterproscan
PF20805Integrin_A_Ig_2Integrin alpha Ig-like domain 2DomainInterproscan
PF20806Integrin_A_Ig_3Integrin alpha Ig-like domain 3DomainInterproscan
PF21317BetaGal_ABD_1Beta-galactosidase, first all-beta domainDomainInterproscan
PF21467BetaGal_gal-bdBeta-galactosidase, galactose-binding domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR001944FamilyGlycoside hydrolase, family 35Interproscan
IPR008979Homologous_superfamilyGalactose-binding-like domain superfamilyInterproscan
IPR013517RepeatFG-GAP repeatInterproscan
IPR013519RepeatIntegrin alpha beta-propellorInterproscan
IPR013649DomainIntegrin alpha, first immunoglubulin-like domainInterproscan
IPR017853Homologous_superfamilyGlycoside hydrolase superfamilyInterproscan
IPR019801Conserved_siteGlycoside hydrolase, family 35, conserved siteInterproscan
IPR028994Homologous_superfamilyIntegrin alpha, N-terminalInterproscan
IPR031330DomainGlycoside hydrolase 35, catalytic domainInterproscan
IPR032695Homologous_superfamilyIntegrin domain superfamilyInterproscan
IPR048285DomainIntegrin alpha, second immunoglobulin-like domainInterproscan
IPR048286DomainIntegrin alpha, third immunoglobulin-like domainInterproscan
IPR048912DomainBeta-galactosidase 1-like , first all-beta domainInterproscan
IPR048913DomainBeta-galactosidase, galactose-binding domainInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR23220INTEGRIN ALPHAInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0004553Molecular Functionhydrolase activity, hydrolyzing O-glycosyl compoundsInterproscan
GO:0005178Molecular Functionintegrin bindingInterproscan
GO:0005975Biological Processcarbohydrate metabolic processInterproscan
GO:0007160Biological Processcell-matrix adhesionInterproscan
GO:0007229Biological Processintegrin-mediated signaling pathwayInterproscan
GO:0008305Cellular Componentintegrin complexInterproscan
GO:0009897Cellular Componentexternal side of plasma membraneInterproscan
GO:0033627Biological Processcell adhesion mediated by integrinInterproscan
GO:0098609Biological Processcell-cell adhesionInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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