Detailed information of Clavulariidae_g2062 in Trachythela sp. YZ-2020 Gene info
Gene IDAnnotationContigStartEndStrand
Clavulariidae_g2062F-BOX ONLY PROTEINctg00004648223954881401+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
Ubiquitin FamilyE3|E3 activity|UBR-box

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01926MMR_HSR150S ribosome-binding GTPaseFamilyInterproscan
PF02207zf-UBRPutative zinc finger in N-recognin (UBR box)FamilyInterproscan
PF06071YchF-GTPase_CProtein of unknown function (DUF933)DomainInterproscan
PF13229Beta_helixRight handed beta helix regionRepeatInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR003126DomainZinc finger, UBR-typeInterproscan
IPR004095DomainTGSInterproscan
IPR004396FamilyRibosome-binding ATPase YchF/Obg-like ATPase 1Interproscan
IPR006073DomainGTP binding domainInterproscan
IPR006626RepeatParallel beta-helix repeatInterproscan
IPR006633DomainCarbohydrate-binding/sugar hydrolysis domainInterproscan
IPR011050Homologous_superfamilyPectin lyase fold/virulence factorInterproscan
IPR012334Homologous_superfamilyPectin lyase foldInterproscan
IPR012675Homologous_superfamilyBeta-grasp domain superfamilyInterproscan
IPR012676Homologous_superfamilyTGS-likeInterproscan
IPR013029DomainYchF, C-terminal domainInterproscan
IPR022441RepeatParallel beta-helix repeat-2Interproscan
IPR023192Homologous_superfamilyTGS-like domain superfamilyInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR031167DomainOBG-type guanine nucleotide-binding (G) domainInterproscan
IPR039448DomainRight handed beta helix domainInterproscan
IPR041706DomainYchF, N-terminalInterproscan
IPR047504DomainF-box only protein 11, UBR-boxInterproscan
IPR051550FamilySCF Complex Subunits and Alginate EpimerasesInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR22990F-BOX ONLY PROTEINInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0005525Molecular FunctionGTP bindingInterproscan
GO:0006511Biological Processubiquitin-dependent protein catabolic processInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0016887Molecular FunctionATP hydrolysis activityInterproscan
GO:0042981Biological Processregulation of apoptotic processInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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