Detailed information of Clavulariidae_g17933 in Trachythela sp. YZ-2020 Gene info
Gene IDAnnotationContigStartEndStrand
Clavulariidae_g17933SNF2/RAD54 HELICASE FAMILYctg00037047674434799769+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00176SNF2-rel_domSNF2-related domainDomainInterproscan
PF00271Helicase_CHelicase conserved C-terminal domainDomainInterproscan
PF04434SWIMSWIM zinc fingerDomainInterproscan
PF12419DUF3670SNF2 Helicase protein FamilyInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000330DomainSNF2, N-terminalInterproscan
IPR001650DomainHelicase, C-terminal domain-likeInterproscan
IPR007527DomainZinc finger, SWIM-typeInterproscan
IPR014001DomainHelicase superfamily 1/2, ATP-binding domainInterproscan
IPR022138FamilyHelicase SWF/SNF-relatedInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR038718Homologous_superfamilySNF2-like, N-terminal domain superfamilyInterproscan
IPR049730DomainSNF2/RAD5-like, C-terminal helicase domainInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR10799SNF2/RAD54 HELICASE FAMILYInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0008094Molecular FunctionATP-dependent activity, acting on DNAInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0045944Biological Processpositive regulation of transcription by RNA polymerase IIInterproscan
GO:0140658Molecular FunctionATP-dependent chromatin remodeler activityInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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