Detailed information of Clavulariidae_g17262 in Trachythela sp. YZ-2020 Gene info
Gene IDAnnotationContigStartEndStrand
Clavulariidae_g17262PENTRAXINctg00035122350212351657+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
--

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00041fn3Fibronectin type III domainDomainInterproscan
PF00058Ldl_recept_bLow-density lipoprotein receptor repeat class BRepeatInterproscan
PF00084SushiSushi repeat (SCR repeat)DomainInterproscan
PF00089TrypsinTrypsinDomainInterproscan
PF00147Fibrinogen_CFibrinogen beta and gamma chains, C-terminal globular domainDomainInterproscan
PF00354PentaxinPentaxin familyDomainInterproscan
PF00629MAMMAM domain, meprin/A5/muDomainInterproscan
PF00754F5_F8_type_CF5/8 type C domainDomainInterproscan
PF07534TLDTLDDomainInterproscan
PF07679I-setImmunoglobulin I-set domainDomainInterproscan
PF07885Ion_trans_2Ion channelFamilyInterproscan
PF13385Laminin_G_3Concanavalin A-like lectin/glucanases superfamilyDomainInterproscan
PF14670FXa_inhibitionCoagulation Factor Xa inhibitory siteDomainInterproscan
PF17662DUF5524Family of unknown function (DUF5524)FamilyInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000033RepeatLDLR class B repeatInterproscan
IPR000421DomainCoagulation factor 5/8 C-terminal domainInterproscan
IPR000436DomainSushi/SCR/CCP domainInterproscan
IPR000519DomainP-type trefoil domainInterproscan
IPR000742DomainEGF-like domainInterproscan
IPR000772DomainRicin B, lectin domainInterproscan
IPR000998DomainMAM domainInterproscan
IPR001254DomainSerine proteases, trypsin domainInterproscan
IPR001759FamilyPentraxin-relatedInterproscan
IPR002181DomainFibrinogen, alpha/beta/gamma chain, C-terminal globular domainInterproscan
IPR003598DomainImmunoglobulin subtype 2Interproscan
IPR003599DomainImmunoglobulin subtypeInterproscan
IPR003961DomainFibronectin type IIIInterproscan
IPR006571DomainTLDc domainInterproscan
IPR007110DomainImmunoglobulin-like domainInterproscan
IPR008979Homologous_superfamilyGalactose-binding-like domain superfamilyInterproscan
IPR009003Homologous_superfamilyPeptidase S1, PA clanInterproscan
IPR011042Homologous_superfamilySix-bladed beta-propeller, TolB-likeInterproscan
IPR013098DomainImmunoglobulin I-setInterproscan
IPR013099DomainPotassium channel domainInterproscan
IPR013320Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR014716Homologous_superfamilyFibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 1Interproscan
IPR018114Active_siteSerine proteases, trypsin family, histidine active siteInterproscan
IPR029044Homologous_superfamilyNucleotide-diphospho-sugar transferasesInterproscan
IPR035976Homologous_superfamilySushi/SCR/CCP superfamilyInterproscan
IPR035992Homologous_superfamilyRicin B-like lectinsInterproscan
IPR036056Homologous_superfamilyFibrinogen-like, C-terminalInterproscan
IPR036116Homologous_superfamilyFibronectin type III superfamilyInterproscan
IPR036179Homologous_superfamilyImmunoglobulin-like domain superfamilyInterproscan
IPR040247FamilyProtein of unknown function DUF5524Interproscan
IPR043504Homologous_superfamilyPeptidase S1, PA clan, chymotrypsin-like foldInterproscan
IPR051360FamilyNeuronal Pentraxin and RelatedInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR19277PENTRAXINInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0004252Molecular Functionserine-type endopeptidase activityInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0006508Biological ProcessproteolysisInterproscan
GO:0016020Cellular ComponentmembraneInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
------

TOP