Detailed information of Clavulariidae_g16112 in Trachythela sp. YZ-2020 Gene info
Gene IDAnnotationContigStartEndStrand
Clavulariidae_g16112VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATEDctg000315281856348802+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00057Ldl_recept_aLow-density lipoprotein receptor domain class ARepeatInterproscan
PF00058Ldl_recept_bLow-density lipoprotein receptor repeat class BRepeatInterproscan
PF07645EGF_CACalcium-binding EGF domainDomainInterproscan
PF12012DUF3504Domain of unknown function (DUF3504)FamilyInterproscan
PF14670FXa_inhibitionCoagulation Factor Xa inhibitory siteDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000033RepeatLDLR class B repeatInterproscan
IPR000152PTMEGF-type aspartate/asparagine hydroxylation siteInterproscan
IPR000742DomainEGF-like domainInterproscan
IPR001881DomainEGF-like calcium-binding domainInterproscan
IPR002172RepeatLow-density lipoprotein (LDL) receptor class A repeatInterproscan
IPR009030Homologous_superfamilyGrowth factor receptor cysteine-rich domain superfamilyInterproscan
IPR011010Homologous_superfamilyDNA breaking-rejoining enzyme, catalytic coreInterproscan
IPR011042Homologous_superfamilySix-bladed beta-propeller, TolB-likeInterproscan
IPR013762Homologous_superfamilyIntegrase-like, catalytic domain superfamilyInterproscan
IPR018097Conserved_siteEGF-like calcium-binding, conserved siteInterproscan
IPR021893DomainDomain of unknown function DUF3504Interproscan
IPR023415Conserved_siteLow-density lipoprotein (LDL) receptor class A, conserved siteInterproscan
IPR036055Homologous_superfamilyLDL receptor-like superfamilyInterproscan
IPR049883DomainNOTCH1 EGF-like calcium-binding domainInterproscan
IPR050778FamilyCueball/EGF/LRP/NidogenInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR46513VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATEDInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0006310Biological ProcessDNA recombinationInterproscan
GO:0015074Biological ProcessDNA integrationInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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