Detailed information of Clavulariidae_g15239 in Trachythela sp. YZ-2020 Gene info
Gene IDAnnotationContigStartEndStrand
Clavulariidae_g15239STRUCTURAL MAINTENANCE OF CHROMOSOMES 5,6 SMC5, SMC6ctg00029676115317635211-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
Transcription Factors FamilyTHAP

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF05485THAPTHAP domainDomainInterproscan
PF13476AAA_23AAA domainDomainInterproscan
PF21787TNP-like_RNaseH_NTNP-like, RNase H N-terminal domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR006612DomainTHAP-type zinc fingerInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR038729DomainRad50/SbcC-type AAA domainInterproscan
IPR048365DomainTransposable element P transposase-like, RNase H domain, N-terminalInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR19306STRUCTURAL MAINTENANCE OF CHROMOSOMES 5,6 SMC5, SMC6Interproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000724Biological Processdouble-strand break repair via homologous recombinationInterproscan
GO:0003684Molecular Functiondamaged DNA bindingInterproscan
GO:0003697Molecular Functionsingle-stranded DNA bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006302Biological Processdouble-strand break repairInterproscan
GO:0016887Molecular FunctionATP hydrolysis activityInterproscan
GO:0030915Cellular ComponentSmc5-Smc6 complexInterproscan
GO:0035861Cellular Componentsite of double-strand breakInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
------

TOP