Detailed information of Clavulariidae_g13803 in Trachythela sp. YZ-2020 Gene info
Gene IDAnnotationContigStartEndStrand
Clavulariidae_g13803ATP-DEPENDENT RNA HELICASE RHLE-RELATEDctg000283834591851690-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00270DEADDEAD/DEAH box helicaseDomainInterproscan
PF00271Helicase_CHelicase conserved C-terminal domainDomainInterproscan
PF00412LIMLIM domainDomainInterproscan
PF00788RARas association (RalGDS/AF-6) domainDomainInterproscan
PF08152GUCTGUCT (NUC152) domainDomainInterproscan
PF16517Nore1-SARAHNovel Ras effector 1 C-terminal SARAH (Sav/Rassf/Hpo) domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000159DomainRas-associating domainInterproscan
IPR001650DomainHelicase, C-terminal domain-likeInterproscan
IPR001781DomainZinc finger, LIM-typeInterproscan
IPR011524DomainSARAH domainInterproscan
IPR011545DomainDEAD/DEAH box helicase domainInterproscan
IPR012562DomainGUCTInterproscan
IPR014001DomainHelicase superfamily 1/2, ATP-binding domainInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR035979Homologous_superfamilyRNA-binding domain superfamilyInterproscan
IPR050079FamilyDEAD box RNA helicaseInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR47959ATP-DEPENDENT RNA HELICASE RHLE-RELATEDInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0004386Molecular Functionhelicase activityInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0007165Biological Processsignal transductionInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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TOP