Detailed information of Clavulariidae_g13528 in Trachythela sp. YZ-2020 Gene info
Gene IDAnnotationContigStartEndStrand
Clavulariidae_g13528SELECTIN LIGAND RELATEDctg000276140217191138-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
Ubiquitin FamilyUBD|Other|Beta-prp
Ubiquitin FamilyE3|E3 adaptor Cullin RING|CDC20
Ubiquitin FamilyE3|E3 adaptor Cullin RING|DWD

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF00400WD40WD domain, G-beta repeatRepeatInterproscan
PF00839Cys_rich_FGFRCysteine rich repeatFamilyInterproscan
PF02138BeachBeige/BEACH domainFamilyInterproscan
PF12640UPF0489UPF0489 domainDomainInterproscan
PF14844PH_BEACHPH domain associated with Beige/BEACHDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000409DomainBEACH domainInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR001680RepeatWD40 repeatInterproscan
IPR001893RepeatCysteine-rich Golgi apparatus protein 1 repeatInterproscan
IPR011993Homologous_superfamilyPH-like domain superfamilyInterproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR017873RepeatCysteine-rich Golgi apparatus protein 1 repeat, eukaryoteInterproscan
IPR019775Conserved_siteWD40 repeat, conserved siteInterproscan
IPR023362DomainPH-BEACH domainInterproscan
IPR024131FamilyUncharacterised protein family UPF0489Interproscan
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR036372Homologous_superfamilyBEACH domain superfamilyInterproscan
IPR039728FamilyGolgi apparatus protein 1Interproscan

PANTHER
PANTHER termDescriptionSource
PTHR11884SELECTIN LIGAND RELATEDInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000139Cellular ComponentGolgi membraneInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0016020Cellular ComponentmembraneInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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