Gene detail

Detailed information of Chiridota_g19399 in Chiridota heheva Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Chiridota_g19399	PA14 DOMAIN-CONTAINING PROTEIN	chr_10	43429582	43486037	-

Gene Structure

More details in Jbrowse Sequence

CDS

Chiridota_g19399

ATGACAGCTCTCAAATTACCGATACTTGGAATTCCAAGTGATCTTATTGGCCTAGTTGGGTTTACGTGGGCATGGATAGGAAGCTACTGCAGAACTTCTAATAAAGGGAAAGTCACAGACATGATTTCAAATGTGTCAGATTCTATTTGTGAAAATGGATGTGTCCACGGAGAATGCATCAAGCCTAATAAATGTCTCTGCCAAGAGGGTTGGACAGGATCGACGTGTGAACAGGATTTCAATGAGTGTGCACTTCGACCATGTCAACATCGTTGCATGAATGAGCCGGGCAGTTTTCGATGCTATTGTGAACAGGGCTTTGCACTTCAAGGCGACAACAGAAATTGCAAACGAGACCGTCGATGTTTATCCAAGCGATGTTCTTTCGGTTGCAAAAAAAAAGGAAAAAAGGTTAAATGCATCTGCCCAGCTGGATGGAAGCTTGCAAACGACAAAAAAAATTGCATAGATATCGACGAGTGTGCGACGGGTAGGGCGACATGCCCACCGCATCTAAGATGTAAAAACAACATGGGCGACTACATATGCCTTTGCCCGCACGGCCAACAGTTTGAGTACAACGAAAGGAGGAAGAAATATCAATGCCAGATCGAGCGAACATGTGCAAACAACCCTTGTTTTGAGGGTGTGACCTGTACACCCAGAAGGCAATTAGATTTCGACCCACGGTTGCCCGTACCCAGAAATATGAGTCTGAAGCTATACCAATGCGGTCCATGTCCGCAGGGTTACATTGGTAACGGAGAAGTATGCGTAGtacctacaactactgctactaccgaaccaccaacaacaacccctcaaacaactacaactcttgcaaccactacacctatgaccactactacacctcccagcacgacttcaatagtacctacaactactgctactaccgaaccaccaacaacgacccctcaagcaactacaactcttgcaaccactacacctatgaccactactacacctcccagcacgactacaatagtacctacaactactgctactaccgaaccaccaacaacgacccctcaagcaactacaactcttgcaaccactacacctatgaccactactacacctcccagcacgactacaatagtacctacaactacagtcactactgaacctccaaccacgacaccactagcaactacTATTCCACCAACAACCACACCACCTGTTCCTGAATTGACTGTTGCGGTTATTGATACAACATATTTAGCCAGCCCCATCGATGACGCTGAAGTTATGATCATGAGATACCCGAACGGAAATTCACACATATTTTCGACGGGGCGCACGGACAGTGCTGGAACAGTAAGGCTTTTCATCCCAGAGAATGAACATATCTTAGTAATGGTTAATAAGAACGGATACCTAAGCTCAACTGCATCATTTATTTTCCGATGGGGtacacGTAACCTTCTGTTGTTTGAATTGGAGAATGAACGTTTAAGAGTGGAGTTTACTTGGCATTCTGGGTACCCAATGAACCAAGCATTTACGCAAGACTCTCTAACTTACAATCTGGATATTTTACGAGGTGCTTTAAATGTCGCTGAAAATCAAAATGTACTCGTCACGGTTCATCCAGTAAATGTTTCGGATTTCAGTGAATTACAAAGGGTGCCCGAACTGTTAGCTTTTACTCCCACAAATAAAGGTGGTGAAACGCATGGCCTGGAGGTTTATGGAATGGCAGAGTTTCGGGCTTCAACACAAACACAAGACGATATCGACGTGCTAAGACCTATAACAATTACTATACCTCTAACTAAATTGCCTAAGAAATTGAAAGTTCGTCAAACTCTACCAGCGTGGTACTGGGACGAAGAATTCGGGCTGTGGCATCATGACGGTGAGGGTGTTGTTAAAATAGGATCCACTGGAGAATGGGTTTGGGAATTTGAAACAGACCACTTTGATTGGTGGAGTGTGGGAAACAAGTACACACAGACTTCATGTGTAACAGTTCGAACCTGCTATGACAAGAAATGCAAGAAACGAGCACCATTTATGCCTATACAGATATGGGGTCTAGATTACAGCTACTATTCTTACAAAATAACCAATAGCGAAGGAGAGGCGTGTTTTCAATACAAACTCAAATCTAAAGTTCAGATTTCATCGCCTTGTTCCCGCGCAGTGGAAACAGTAGCATCGTCGAAGAAGACCAATAAACCCGCTTGTTGTTCAATAGACTATGGAAGACAGATTCTAAAACACTACGGGCCAAAGAAAAAAGTAAAATCATGTAAAATAAGAGTGGATCTTCAAGTCTCCGATAAAAAGATGACTGATGCTTGTTTAGATCCAGGGTCTGTCTGGCATGCAATGCGGCACCCTTCTTCGTTTCCAGTTAATGTAGGAACAAGTATTCAATATAAAGATAATGTGGAGTTGCGTACTGTTAAAGAGATAAGTGCAGTTTTGAAGAGTACATATCAAGAATGA

Transcript

Chiridota_g19399

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF10577	FAM171A1-2-B_N	FAM171A1/A2/B, N-terminal	Domain	Interproscan
PF12662	cEGF	Complement Clr-like EGF-like	Domain	Interproscan
PF21700	DL-JAG_EGF-like	Delta-like/Jagged, EGF-like domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000152	PTM	EGF-type aspartate/asparagine hydroxylation site	Interproscan
IPR000742	Domain	EGF-like domain	Interproscan
IPR001881	Domain	EGF-like calcium-binding domain	Interproscan
IPR009030	Homologous_superfamily	Growth factor receptor cysteine-rich domain superfamily	Interproscan
IPR018097	Conserved_site	EGF-like calcium-binding, conserved site	Interproscan
IPR026823	Domain	Complement Clr-like EGF domain	Interproscan
IPR048530	Domain	FAM171, N-terminal	Interproscan
IPR052235	Family	Nephronectin domain-containing protein	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24050	PA14 DOMAIN-CONTAINING PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005509	Molecular Function	calcium ion binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-