Gene detail

Detailed information of Chiridota_g10366 in Chiridota heheva Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Chiridota_g10366	NUCLEOPROTEIN TPR-RELATED	chr_5	32674672	32778387	-

Gene Structure

More details in Jbrowse Sequence

CDS

Chiridota_g10366

atgttggagattttagttattataagaaaaagattcacaggattagttcagtggtcaagcaagtttatcttatatgaaagaggacttaaagagaaaccaaatggtgatgaagccacttcaatatcatctgttaaggacatattcaagttctgccttatctgtgtaaaaaagactggtgtaGAAATTGAGGAAAAAGCGCCGATATTACAACAACAAAGAGAAGATTACGAGAATGCTCTGGAGACAACCAATCAGCTGTCAGTTAAACTTGATGCTGCCCTATTGGAAAGTGAGCAGCAGAGAATAGCTGCAGATGAGGCAGAGAGGATGACTGGCCATCTGTCAAGGGAAAAGAACAGGTTGAAACAACAATGTGGAGACCTCGCTCAACAGGTGAGATCTCTTTTAAGAGAAGTTGAAGAGGTGCGGGGAGGTCCCATCCAGAGTTCAGAATTTGATATGGATGTGTCTTCTTCCAGTGGTGATGTCACCAGCTCCTCACAAATCATTGACAGACACCTTGTCACATTTAAGAACATTGAGGAACTTCAGAAGCAGAATGAGCATCTCCTGGGTGTGGTACGGGAGCTCAGTGAGAATAAGGAACAGGAAGAAATGGAGACATTAGAATCAAAGACATCAGAGCTAAAGATCCAACTTGACTCGGCATTAGAGGAGCTAGAAGACATGCGATCAAGCCGCAGACGACAAATGGAGATGGTGGAATCGCTTGTTCAGCAAAGGGATATGTACAGGGTGCTTCTTGTCCAAGCAGGAGCCTCTCCACCCCCGCTCTCAGCAGTTTCTCTTCTTCAAAGTCCAGTTGTTAAAACCCCGACAGGACCTGCAGCTGTCTCCGTCTCAACACAGAAAAGTCCAGCCACAATTAAAAGTCCCACCCCTAAAAAAGATTCTTCCTCGCTTGGACAAAAGGAGTACGAGTTAGCTTTGCAGACGCTGCAGGCAGAATTTGAAACATACAGGACTGAGAGGGCACAAAATGAAAAGATTTTGAGTGAACAGGTGGATGCTATGAGGAAAGAGGCGTCCGACTTCAGGGTACAGAATGCTAAACTTTCATCACAGCTTGAATTTGCCAGTGAGCGTTTTAAGATGCTGCAGTCAACTGCAGAGAGCTACAAGAAGGAGATTGCTTCCGTCAGGGAGAAGAACCAGAAGCTGTCCTCAGAGATGATCAAGAATCAACAGTCTATCAGTATGCTTACTCAAGACTTAATGGCATCTCAAGAGAAATTAAACCGAGCAGAAGTCGAAAGGCAGAACTTGAAGACAGAGAGAAATATGCTGAAGAACGTTGAGCAGCGACTGATGCAAGAAAGCATGTCACTCCGCAAAGAACAACAGAGCCAAAGCTTGCTCCTCACCAACCTGCAAACCATACAGACTAATCTGGATAGGTCAGATTTTGAAACCAAAGCAAGATTGACCAATCAAATGCAAGGAATGGAAAGAGAGGTGAACATGTTGCGTAGGAAGCTGGGCGGAGAGAGTGACCAACACAAAACTGTGCTCAGAACATGGGAGAGTAAAGTTCAGAATTTACAGCGTCAATTGAACAATGAGATGGATGGACATCAGAAGACTCGAGATGAGCTCAGCAAGGTGAAGATGGATTTGCAGAATATGAAACAACAGTGTTCCACTGCAGAAGCACAATTGGTTGCATCTCAGATCAAACTTGAATCGGCTCTGAAGGAACTTAAAGATCAAGAAGGCAAAGGAAAAGATGCCCCAGATACTGCTATGATAGATGCAGAGATGCGGGAACTGAGACAGGAACTGAAGGTGAAGCAAAATGAAATAATAGCCCTTAGCAGCAAAGTCATGAAAGCGGAGCAACATGCGGAGCAGTTCAAGTCCATCAGTACGGCTGTGGAGAACAGCCTCAAGGAGCAGAATGAGGCGAGTCAGACCTTCAGGGACACCATGGAGAAAAGAACGCAAGAGTTGCAGCAAGCTTGTGAAAGACTTGAGAATAAATTGGCGGAGGTTGAAGAAGAACGAAATGAACTGAAGAATGAGAATGCTGGTTTAGCAGATGCTGCTGCAGTTCAGACTGCAGATTTGCGTAAAAGTGTTACTCAGCTGCAGGAGGAACTTCAAGATGCGACCATCAGATGCAAAGAAGCCGAGATCCAAGAAGCTGTCTCAAGGCAAGACAGCCAGCAGCAGTCTCTTGTGGCAAAAGAGGCACAAGACAAGTATGAAAGGGAATTTCTGTTACATGCAGCAGATGTTCAGCAACTAGTTACCATCAGGGAACAGCTTTCAGCTCATAACCAAAAAGTGTCAGATGCGGAAGAAGCTGAGAAGAGAATCCGGGATGAGCTGACGTCTTCCAAGGCATCTTGGGAGGAGCAGCTCAGGATTCAGAGAGATGAGGTGCAAGGATTGCAGAACAGATGCAGCGAATTAGAGGGACAGAATGGGATGCTTCATCAGCAATTGGAAGCGCTTTCAAATCAAATTGTTGAGACGCAATCTGCAAGGAGAGAATCCACAGGAAGTCTAAACATTTCATTCAGTGATGAGAATAAATCAACCGAGCAGTTGTTAGAGGTCATCAAGTTCCTAAGACGAGAAAAGGAGATTGCTGAGACAAGACTGGAGTTGGTGCAGTGTGAGGGACTGAGGTCGAAGCAGAAGTCACAGTCACTGGAGAGGCAACTGACAGAGACCCAGAGGACCCTGGGAGAGGAGAGAGACAGAGCTCAGgttttggcacaaacaacTGCCCAGCACCAAGAGGTTCTCAAGAAGGTAGAGACCCTGAATGCTCTGACGGACAGCAATCGCTTACTGAGGGAGGAGAAGGAGAAACTGGATCAACAGCAGCAGCAGACAGAATCTAAGGTCAATCAGCTGGAAAGAGACATTCTTCCCCTTCAGGAGCAAAATCGTGAAATATCCTCCCAGCTGGACGTCCTGACAGCTGAGAAGCACGCCCTCACTAGTGAGGTCACAAGATGGAGACAACGTACCAATCACCTGATTGAACAGTGCAACAAAGCTGACCCAGAGGAGCAGAAGAAATTGCTTCAAGAAAAAGAGGCAAACAAGAAGGCCATCTCAGACCTCAGAGAGGAGACCATGCGATACAAGGCTGAGATTTCTAAACTGAATGGACTGTTAATGAACTCAAAGAATGAAATTGCCAAACAGAACATGACTATGTCAAGCGTGCAATCCAAGCACACATTGGAACTACTTAAATCTAGGGGGGAAGAGAATGCACTGAGGGCAGAGGTGAAGTCCAAGACCGATGAGATCACAGCAAAGGACAAAGAGATAGATGAAAAGaataagatcaataaccagGTTAAGAGGTTAGGTCGTCGATATAAATCACAGTACGAGGATACTAAGAAGCAGCTGGATGAAGTACAGGCCAAGCTGACCAGTCAGCAGGAGGAGGCATCAAAACCAAACCCAGAGATGGAGGCTAAGATTAAGGCACTGGAGGAGAGGTTGAACTTCCTACAAGAAACAGTAGGTACACACGAACAATCCGAAGCGACTCTTAAGGCACAAATTGCTGAGAAGGAGGAAAAAGAGAGGAAATCCAAGTCAGTCTTGAATTCTGCCAAGCAGAAGATCCAACAGCTTACAAGTGAGAAGGAAAGAAACACCTTAGAGAATGAGAGACTGAGGCAAGAGCTTGGTGAGATGCAAGGTCAGCTGTCCGTCATCCAAGTCTCCAAAGCACAGATGGAGAAGAAAATGGAGAGTCAGAGGCAGGAATTCCTTAAGCGCATCAACCATCTGGAAAAGGAAACTAAAGATGCCAGGGATGAGAGGGATAAAATGCGAAGTGAACGTGCGGCTGAGCAGCTGAAGAGGGAGACCCAGCTAGCTGAACAAGAGAGTTTACAACAAGCTATGATGACCACACCAGACAGGGCCAGCTCATCTAGGGAAGAGCCTCCCACTGCAAACATCAAACCACTGTCATCTCCAGCCTCAGCAGTAGGCACGGCAAAAGCCATTCCAGTGTCCAGTGGTCCAAAAGCCACGGCCAGCATTCGACCAATCGCTGTCACACCATCCACAAGCAGCGGAGTGTCATCGTCCACTCCCACCACTCGTATGGCGACCGTCATGCCTCACACCATTGAGCCAACTCAGGTCAACACACCAGATGaccatgaagTTCAAACAAGTGAGCCTCCCACTGTACCCATGGTGTCAGCCACACCAATTCAGGCTGTGACACCAACCCAGCAAGCAGTACCAATTGCCCGCACTGAGCCCATGTCACAGGAACCAGAGCCCTATGAGGACGACACACCCACAAGTGGTCACCCATTGGATCAGTCTGTTGCATATCAGAACGaaaatcttacactggttccagtcaaattgaaaatccagcGTCCAACAACCTCGTCGGAACCATCCAGTTCATCGTCTGTTCCATCCTCTCATATGGTGCAACAAAGTTCAAAGAGACAACGTGATGAACCCACTGAAAGTGATGACAGTATAATGGAGAGAGAGATACATCCACCCACAGAGAAGAGACAGCGTGTTACCGGTCATCCTATTGCCAGAATTCAGGCCAGAGAAGAAACTCATGTTCAACCAACCGTCCGCGAAGCGGAACGATCTGAAGCAGTCATCCCAACAATTGCACAGTATTTTGAAGAGAGGCAAGAACCGGCCACTGCTAGTGTCCATCCAGAGCAAAGCGTCCCTCCTGAGAGGAAAGAGAGGATTGTGGGTACGGTTCAGGGAGAGCGGATTGAGCCGGTCGTAGCCAGTAATCAGGTAGAATCTCAGCAGGCTTCTCAGTCTGGAACAGAGGATCCTCAACGACATAGAGAAAGATCTGCTGAGCCACAGTCCACTGGTACCCCAGACGATCGTGATGTGAGCCCTGGTCCTGAGGATGACCAGAAGCCAACCCCCTCTCATAGCCAGGACGAGGTAGAGGAGGAGGTCATCTTAATTGATGACAACGATGATATTCCTGATCAGGTTGATTTGCatggtgatggtcgtgatgatggtgatgaggatgtggatgagtacgatgaACAAGAGGAGCTGGAAGGAGAAGGCTTCATTGAGGATACCTATAATGAGGATGATGATGATCAGCTGCCATACCAGgatgaggatgaggaggacatggaggacgacgatgaACTGGGAGAGGAAGCCATGGAGGGAGAGTCAGACCAAGGGGAAAACCCCATGGACAACGACATTGTGGAAATCATAGATGATGATGTGGAAGAGCATGGTGAGGCCTCAGAGACGGGAACCCAGCCCTTTGATGTGACTGAGCAACCCTCCCAGGCTATGGAGGCACAACAGTCCTCCAGGGGTCCACCTCAGCTGGTTGTGGAGCCTCCTGAGAGTAGCCAGGTCATAGTTCAGGAGGTCCAAGTGGCTCCACCAGTGGTTCTTGGCATGAGAAGAGATAGATTGACATCTCTTGGAAGACATCCACCTtcgtttgctttgGGCAATCCATTTGAAGATGTTAGTGATGACCGTCAGGTTCCAAGTACACCAACTCTCTTTGTTCCTCACAGAAGTGATGGATTTGCAGAAGCTATCAATTCACCACTGTTGGTGCATCAGCGGTTCCATTTCAGTACCCCTGAAGGAGAGGCTCGAGCCCCAGGATTGGCTCAGCTTGAAACAGTTGGAGATCTTGGCATGGATGCAACCCACATATATCTTCCTGGTGGCGAGGATGAGGCAGGTGGGGGTCGCAGTGTGCCTACCAACCCACTCCAGATGCTAGCACCAGTGAGTGTCGTAGAGGCTGGGTCTAGCTTTGTGGAATCCACCAATCGCCCAGAGTCAACGGTGGCTCCTACAAGCGGCGACCAGGTGTTGACCAGCAGTGGCGTCTCTTCTCAGAAGGGTGAGGATGATGCAGGGACAGGGGTGGTACCTGGACAACAAAGGTCTAGCACCTCCCCATCACCTCCCACCAGCAGTGAGCAAGTGGTGTATCCCAAGATGCGATCCATGGCACCCTCGACAGCCACCGTCATGCCAGCCACAAAGGAGGAGGAGGATAGATCAACCGTGAGTGGCAGTGAGGAGGTGTCACATGAGGCAGCCGCAACCTCTCGGCCAGAGACATCTGGAAACCAACAGTCAGGGAATGCACAACCCTCATCAAGTGGTGACGGAGAAACAAAGCAAAAGAAGCGCATTGTGTGGAGTACGGAAGGACCAAGCACCAGTCAACAAGCTGTGCAGCCTCAAAGCTCATCAAATGCAGAGCATGTCAGACCAACACCAAGGCTGCAAACGGCCACCAGAGGCGGACAAGGTCGTGTCATTCGCAGAATACCAAGAGGCAAAGTTCGTGGAAGAGGACATATGATGTCACGAGGAGGTCGTGGAGGGATGTGA

Transcript

Chiridota_g10366

Protein

Chiridota_g10366

MLEILVIIRKRFTGLVQWSSKFILYERGLKEKPNGDEATSISSVKDIFKFCLICVKKTGVEIEEKAPILQQQREDYENALETTNQLSVKLDAALLESEQQRIAADEAERMTGHLSREKNRLKQQCGDLAQQVRSLLREVEEVRGGPIQSSEFDMDVSSSSGDVTSSSQIIDRHLVTFKNIEELQKQNEHLLGVVRELSENKEQEEMETLESKTSELKIQLDSALEELEDMRSSRRRQMEMVESLVQQRDMYRVLLVQAGASPPPLSAVSLLQSPVVKTPTGPAAVSVSTQKSPATIKSPTPKKDSSSLGQKEYELALQTLQAEFETYRTERAQNEKILSEQVDAMRKEASDFRVQNAKLSSQLEFASERFKMLQSTAESYKKEIASVREKNQKLSSEMIKNQQSISMLTQDLMASQEKLNRAEVERQNLKTERNMLKNVEQRLMQESMSLRKEQQSQSLLLTNLQTIQTNLDRSDFETKARLTNQMQGMEREVNMLRRKLGGESDQHKTVLRTWESKVQNLQRQLNNEMDGHQKTRDELSKVKMDLQNMKQQCSTAEAQLVASQIKLESALKELKDQEGKGKDAPDTAMIDAEMRELRQELKVKQNEIIALSSKVMKAEQHAEQFKSISTAVENSLKEQNEASQTFRDTMEKRTQELQQACERLENKLAEVEEERNELKNENAGLADAAAVQTADLRKSVTQLQEELQDATIRCKEAEIQEAVSRQDSQQQSLVAKEAQDKYEREFLLHAADVQQLVTIREQLSAHNQKVSDAEEAEKRIRDELTSSKASWEEQLRIQRDEVQGLQNRCSELEGQNGMLHQQLEALSNQIVETQSARRESTGSLNISFSDENKSTEQLLEVIKFLRREKEIAETRLELVQCEGLRSKQKSQSLERQLTETQRTLGEERDRAQVLAQTTAQHQEVLKKVETLNALTDSNRLLREEKEKLDQQQQQTESKVNQLERDILPLQEQNREISSQLDVLTAEKHALTSEVTRWRQRTNHLIEQCNKADPEEQKKLLQEKEANKKAISDLREETMRYKAEISKLNGLLMNSKNEIAKQNMTMSSVQSKHTLELLKSRGEENALRAEVKSKTDEITAKDKEIDEKNKINNQVKRLGRRYKSQYEDTKKQLDEVQAKLTSQQEEASKPNPEMEAKIKALEERLNFLQETVGTHEQSEATLKAQIAEKEEKERKSKSVLNSAKQKIQQLTSEKERNTLENERLRQELGEMQGQLSVIQVSKAQMEKKMESQRQEFLKRINHLEKETKDARDERDKMRSERAAEQLKRETQLAEQESLQQAMMTTPDRASSSREEPPTANIKPLSSPASAVGTAKAIPVSSGPKATASIRPIAVTPSTSSGVSSSTPTTRMATVMPHTIEPTQVNTPDDHEVQTSEPPTVPMVSATPIQAVTPTQQAVPIARTEPMSQEPEPYEDDTPTSGHPLDQSVAYQNENLTLVPVKLKIQRPTTSSEPSSSSSVPSSHMVQQSSKRQRDEPTESDDSIMEREIHPPTEKRQRVTGHPIARIQAREETHVQPTVREAERSEAVIPTIAQYFEERQEPATASVHPEQSVPPERKERIVGTVQGERIEPVVASNQVESQQASQSGTEDPQRHRERSAEPQSTGTPDDRDVSPGPEDDQKPTPSHSQDEVEEEVILIDDNDDIPDQVDLHGDGRDDGDEDVDEYDEQEELEGEGFIEDTYNEDDDDQLPYQDEDEEDMEDDDELGEEAMEGESDQGENPMDNDIVEIIDDDVEEHGEASETGTQPFDVTEQPSQAMEAQQSSRGPPQLVVEPPESSQVIVQEVQVAPPVVLGMRRDRLTSLGRHPPSFALGNPFEDVSDDRQVPSTPTLFVPHRSDGFAEAINSPLLVHQRFHFSTPEGEARAPGLAQLETVGDLGMDATHIYLPGGEDEAGGGRSVPTNPLQMLAPVSVVEAGSSFVESTNRPESTVAPTSGDQVLTSSGVSSQKGEDDAGTGVVPGQQRSSTSPSPPTSSEQVVYPKMRSMAPSTATVMPATKEEEDRSTVSGSEEVSHEAAATSRPETSGNQQSGNAQPSSSGDGETKQKKRIVWSTEGPSTSQQAVQPQSSSNAEHVRPTPRLQTATRGGQGRVIRRIPRGKVRGRGHMMSRGGRGGM*

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07926	TPR_MLP1_2	TPR/MLP1/MLP2-like protein	Coiled-coil	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR012929	Domain	Nucleoprotein TPR/MLP1	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR18898	NUCLEOPROTEIN TPR-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005643	Cellular Component	nuclear pore	Interproscan
GO:0006406	Biological Process	mRNA export from nucleus	Interproscan
GO:0006606	Biological Process	protein import into nucleus	Interproscan
GO:0017056	Molecular Function	structural constituent of nuclear pore	Interproscan
GO:1901673	Biological Process	regulation of mitotic spindle assembly	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-