| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| CAI8054640.1 | 30S RIBOSOMAL PROTEIN S13/40S RIBOSOMAL PROTEIN S18 | contig_8678_pilon | 22752 | 23535 | - |
| CDS | |||||
| CAI8054640.1 | |||||
| Transcript |
| - |
| Protein |
| CAI8054640.1 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00411 | Ribosomal_S11 | Ribosomal protein S11 | Family | Interproscan |
| PF00416 | Ribosomal_S13 | Ribosomal protein S13/S18 | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR001892 | Family | Small ribosomal subunit protein uS13 | Interproscan |
| IPR001971 | Family | Small ribosomal subunit protein uS11 | Interproscan |
| IPR010979 | Homologous_superfamily | Small ribosomal subunit protein uS13-like, H2TH | Interproscan |
| IPR018102 | Conserved_site | Small ribosomal subunit protein uS11, conserved site | Interproscan |
| IPR018269 | Conserved_site | Small ribosomal subunit protein uS13, conserved site | Interproscan |
| IPR019980 | Family | Small ribosomal subunit protein uS13, bacterial-type | Interproscan |
| IPR027437 | Homologous_superfamily | Small ribosomal subunit protein uS13, C-terminal | Interproscan |
| IPR036967 | Homologous_superfamily | Small ribosomal subunit protein uS11 superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR10871 | 30S RIBOSOMAL PROTEIN S13/40S RIBOSOMAL PROTEIN S18 | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0003676 | Molecular Function | nucleic acid binding | Interproscan |
| GO:0003723 | Molecular Function | RNA binding | Interproscan |
| GO:0003735 | Molecular Function | structural constituent of ribosome | Interproscan |
| GO:0005829 | Cellular Component | cytosol | Interproscan |
| GO:0005840 | Cellular Component | ribosome | Interproscan |
| GO:0006412 | Biological Process | translation | Interproscan |
| GO:0015935 | Cellular Component | small ribosomal subunit | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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