| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| CAI8053166.1 | UVRC/OXIDOREDUCTASE | contig_8194_pilon | 44969 | 46573 | - |
| CDS | |||||
| CAI8053166.1 | |||||
| Transcript |
| - |
| Protein |
| CAI8053166.1 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF02151 | UVR | UvrB/uvrC motif | Family | Interproscan |
| PF08459 | UvrC_RNaseH_dom | UvrC RNAse H endonuclease domain | Domain | Interproscan |
| PF12826 | HHH_2 | Helix-hairpin-helix motif | Motif | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR001162 | Domain | UvrC, RNAse H endonuclease domain | Interproscan |
| IPR001943 | Domain | UVR domain | Interproscan |
| IPR003583 | Domain | Helix-hairpin-helix DNA-binding motif, class 1 | Interproscan |
| IPR004791 | Family | UvrABC system, subunit C | Interproscan |
| IPR010994 | Homologous_superfamily | RuvA domain 2-like | Interproscan |
| IPR036876 | Homologous_superfamily | UVR domain superfamily | Interproscan |
| IPR038476 | Homologous_superfamily | UvrC, RNAse H endonuclease domain superfamily | Interproscan |
| IPR041663 | Domain | DisA/LigA, helix-hairpin-helix motif | Interproscan |
| IPR050066 | Family | UvrABC system protein C | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR30562 | UVRC/OXIDOREDUCTASE | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0003677 | Molecular Function | DNA binding | Interproscan |
| GO:0005515 | Molecular Function | protein binding | Interproscan |
| GO:0006281 | Biological Process | DNA repair | Interproscan |
| GO:0006289 | Biological Process | nucleotide-excision repair | Interproscan |
| GO:0006974 | Biological Process | DNA damage response | Interproscan |
| GO:0009380 | Cellular Component | excinuclease repair complex | Interproscan |
| GO:0009381 | Molecular Function | excinuclease ABC activity | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-Yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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