Detailed information of CAI8051017.1 in Geodia barretti Gene info
Gene IDAnnotationScaffoldStartEndStrand
CAI8051017.1DNA LIGASE 1/3 FAMILY MEMBERcontig_760_pilon3084834273-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF04679DNA_ligase_A_CATP dependent DNA ligase C terminal region FamilyInterproscan
PF16759LIG3_BRCTDNA ligase 3 BRCT domainFamilyInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR001357DomainBRCT domainInterproscan
IPR012309DomainDNA ligase, ATP-dependent, C-terminalInterproscan
IPR012340Homologous_superfamilyNucleic acid-binding, OB-foldInterproscan
IPR031916DomainDNA ligase 3, BRCT domainInterproscan
IPR036420Homologous_superfamilyBRCT domain superfamilyInterproscan
IPR050191FamilyATP-dependent DNA ligaseInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR45674DNA LIGASE 1/3 FAMILY MEMBERInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0003910Molecular FunctionDNA ligase (ATP) activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006266Biological ProcessDNA ligationInterproscan
GO:0006273Biological Processlagging strand elongationInterproscan
GO:0006281Biological ProcessDNA repairInterproscan
GO:0006288Biological Processbase-excision repair, DNA ligationInterproscan
GO:0006302Biological Processdouble-strand break repairInterproscan
GO:0006310Biological ProcessDNA recombinationInterproscan
GO:0070421Cellular ComponentDNA ligase III-XRCC1 complexInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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