| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| CAI8048589.1 | RNA M5U METHYLTRANSFERASE | contig_7068_pilon | 20202 | 22006 | - |
| CDS | |||||
| CAI8048589.1 | |||||
| Transcript |
| - |
| Protein |
| CAI8048589.1 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF05958 | tRNA_U5-meth_tr | tRNA (Uracil-5-)-methyltransferase | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR010280 | Family | (Uracil-5)-methyltransferase family | Interproscan |
| IPR011010 | Homologous_superfamily | DNA breaking-rejoining enzyme, catalytic core | Interproscan |
| IPR012340 | Homologous_superfamily | Nucleic acid-binding, OB-fold | Interproscan |
| IPR029063 | Homologous_superfamily | S-adenosyl-L-methionine-dependent methyltransferase superfamily | Interproscan |
| IPR030391 | Conserved_site | RNA methyltransferase TrmA, conserved site | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR11061 | RNA M5U METHYLTRANSFERASE | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0003677 | Molecular Function | DNA binding | Interproscan |
| GO:0006396 | Biological Process | RNA processing | Interproscan |
| GO:0008173 | Molecular Function | RNA methyltransferase activity | Interproscan |
| GO:0070041 | Molecular Function | rRNA (uridine-C5-)-methyltransferase activity | Interproscan |
| GO:0070475 | Biological Process | rRNA base methylation | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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