Detailed information of CAI8048575.1 in Geodia barretti Gene info
Gene IDAnnotationScaffoldStartEndStrand
CAI8048575.1SRCR DOMAIN-CONTAINING PROTEINcontig_7065_pilon1016287-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
--

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00057Ldl_recept_aLow-density lipoprotein receptor domain class ARepeatInterproscan
PF00084SushiSushi repeat (SCR repeat)DomainInterproscan
PF00530SRCRScavenger receptor cysteine-rich domainDomainInterproscan
PF07645EGF_CACalcium-binding EGF domainDomainInterproscan
PF12947EGF_3EGF domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000152PTMEGF-type aspartate/asparagine hydroxylation siteInterproscan
IPR000436DomainSushi/SCR/CCP domainInterproscan
IPR000742DomainEGF-like domainInterproscan
IPR001190DomainSRCR domainInterproscan
IPR001881DomainEGF-like calcium-binding domainInterproscan
IPR002172RepeatLow-density lipoprotein (LDL) receptor class A repeatInterproscan
IPR017448DomainSRCR-like domainInterproscan
IPR018097Conserved_siteEGF-like calcium-binding, conserved siteInterproscan
IPR024731DomainEGF domainInterproscan
IPR035976Homologous_superfamilySushi/SCR/CCP superfamilyInterproscan
IPR036055Homologous_superfamilyLDL receptor-like superfamilyInterproscan
IPR036772Homologous_superfamilySRCR-like domain superfamilyInterproscan
IPR049883DomainNOTCH1 EGF-like calcium-binding domainInterproscan
IPR050686FamilySRCR-S1 Scavenger ReceptorInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR48071SRCR DOMAIN-CONTAINING PROTEINInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0016020Cellular ComponentmembraneInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
------

TOP