| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| CAI8045055.1 | LEUCINE-RICH REPEAT AND IQ DOMAIN-CONTAINING PROTEIN 1-RELATED | contig_620_pilon | 47428 | 52113 | + |
| CDS | |||||
| CAI8045055.1 | |||||
| Transcript |
| - |
| Protein |
| CAI8045055.1 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00404 | Dockerin_1 | Dockerin type I domain | Domain | Interproscan |
| PF00963 | Cohesin | Cohesin domain | Domain | Interproscan |
| PF07635 | PSCyt1 | Planctomycete cytochrome C | Family | Interproscan |
| PF12799 | LRR_4 | Leucine Rich repeats (2 copies) | Repeat | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR001611 | Repeat | Leucine-rich repeat | Interproscan |
| IPR002048 | Domain | EF-hand domain | Interproscan |
| IPR002102 | Domain | Cellulosome anchoring protein, cohesin domain | Interproscan |
| IPR002105 | Repeat | Dockerin type I repeat | Interproscan |
| IPR003591 | Repeat | Leucine-rich repeat, typical subtype | Interproscan |
| IPR008965 | Homologous_superfamily | CBM2/CBM3, carbohydrate-binding domain superfamily | Interproscan |
| IPR011429 | Domain | Cytochrome C, Planctomycete-type | Interproscan |
| IPR016134 | Domain | Dockerin domain | Interproscan |
| IPR018247 | Binding_site | EF-Hand 1, calcium-binding site | Interproscan |
| IPR025875 | Repeat | Leucine rich repeat 4 | Interproscan |
| IPR032675 | Homologous_superfamily | Leucine-rich repeat domain superfamily | Interproscan |
| IPR036439 | Homologous_superfamily | Dockerin domain superfamily | Interproscan |
| IPR036909 | Homologous_superfamily | Cytochrome c-like domain superfamily | Interproscan |
| IPR050836 | Family | SDS22/Internalin LRR-containing | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR46652 | LEUCINE-RICH REPEAT AND IQ DOMAIN-CONTAINING PROTEIN 1-RELATED | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0000272 | Biological Process | polysaccharide catabolic process | Interproscan |
| GO:0004553 | Molecular Function | hydrolase activity, hydrolyzing O-glycosyl compounds | Interproscan |
| GO:0005509 | Molecular Function | calcium ion binding | Interproscan |
| GO:0005515 | Molecular Function | protein binding | Interproscan |
| GO:0009055 | Molecular Function | electron transfer activity | Interproscan |
| GO:0020037 | Molecular Function | heme binding | Interproscan |
| GO:0030246 | Molecular Function | carbohydrate binding | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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