| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| CAI8039591.1 | L-SERYL-TRNA(SEC) SELENIUM TRANSFERASE | contig_5111_pilon | 25116 | 28415 | - |
| CDS | |||||
| CAI8039591.1 | |||||
| Transcript |
| - |
| Protein |
| CAI8039591.1 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00009 | GTP_EFTU | Elongation factor Tu GTP binding domain | Domain | Interproscan |
| PF03144 | GTP_EFTU_D2 | Elongation factor Tu domain 2 | Domain | Interproscan |
| PF03841 | SelA | L-seryl-tRNA selenium transferase | Domain | Interproscan |
| PF09106 | SelB-wing_2 | Elongation factor SelB, winged helix | Domain | Interproscan |
| PF12390 | Se-cys_synth_N | Selenocysteine synthase N terminal | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR000795 | Domain | Translational (tr)-type GTP-binding domain | Interproscan |
| IPR004161 | Domain | Translation elongation factor EFTu-like, domain 2 | Interproscan |
| IPR004534 | Family | L-seryl-tRNA(Sec) selenium transferase | Interproscan |
| IPR009000 | Homologous_superfamily | Translation protein, beta-barrel domain superfamily | Interproscan |
| IPR015190 | Domain | Translation elongation factor SelB, winged helix, type 2 | Interproscan |
| IPR015421 | Homologous_superfamily | Pyridoxal phosphate-dependent transferase, major domain | Interproscan |
| IPR015424 | Homologous_superfamily | Pyridoxal phosphate-dependent transferase | Interproscan |
| IPR018319 | Family | L-seryl-tRNA selenium transferase-like | Interproscan |
| IPR025862 | Domain | L-seryl-tRNA selenium transferase N-terminal domain | Interproscan |
| IPR027417 | Homologous_superfamily | P-loop containing nucleoside triphosphate hydrolase | Interproscan |
| IPR036390 | Homologous_superfamily | Winged helix DNA-binding domain superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR32328 | L-SERYL-TRNA(SEC) SELENIUM TRANSFERASE | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0001514 | Biological Process | selenocysteine incorporation | Interproscan |
| GO:0003723 | Molecular Function | RNA binding | Interproscan |
| GO:0003746 | Molecular Function | translation elongation factor activity | Interproscan |
| GO:0003924 | Molecular Function | GTPase activity | Interproscan |
| GO:0004125 | Molecular Function | L-seryl-tRNA(Sec) selenium transferase activity | Interproscan |
| GO:0005525 | Molecular Function | GTP binding | Interproscan |
| GO:0005737 | Cellular Component | cytoplasm | Interproscan |
| GO:0097056 | Biological Process | obsolete selenocysteinyl-tRNA(Sec) biosynthetic process | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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