| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| CAI8038296.1 | ATP-DEPENDENT DNA HELICASE HOMOLOG RECG, CHLOROPLASTIC | contig_4921_pilon | 52807 | 55290 | + |
| CDS | |||||
| CAI8038296.1 | |||||
| Transcript |
| - |
| Protein |
| CAI8038296.1 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00270 | DEAD | DEAD/DEAH box helicase | Domain | Interproscan |
| PF00271 | Helicase_C | Helicase conserved C-terminal domain | Domain | Interproscan |
| PF01042 | Ribonuc_L-PSP | Endoribonuclease L-PSP | Domain | Interproscan |
| PF17191 | RecG_wedge | RecG wedge domain | Domain | Interproscan |
| PF19833 | RecG_dom3_C | ATP-dependent DNA helicase RecG, domain 3, C-terminal | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR001650 | Domain | Helicase, C-terminal domain-like | Interproscan |
| IPR004609 | Family | ATP-dependent DNA helicase RecG | Interproscan |
| IPR006056 | Family | RidA family | Interproscan |
| IPR006175 | Family | YjgF/YER057c/UK114 family | Interproscan |
| IPR011545 | Domain | DEAD/DEAH box helicase domain | Interproscan |
| IPR012340 | Homologous_superfamily | Nucleic acid-binding, OB-fold | Interproscan |
| IPR014001 | Domain | Helicase superfamily 1/2, ATP-binding domain | Interproscan |
| IPR027417 | Homologous_superfamily | P-loop containing nucleoside triphosphate hydrolase | Interproscan |
| IPR033454 | Domain | RecG, wedge domain | Interproscan |
| IPR035959 | Homologous_superfamily | RutC-like superfamily | Interproscan |
| IPR045562 | Domain | ATP-dependent DNA helicase RecG, domain 3, C-terminal | Interproscan |
| IPR047112 | Family | ATP-dependent DNA helicase RecG/Transcription-repair-coupling factor | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR47964 | ATP-DEPENDENT DNA HELICASE HOMOLOG RECG, CHLOROPLASTIC | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0003676 | Molecular Function | nucleic acid binding | Interproscan |
| GO:0003678 | Molecular Function | DNA helicase activity | Interproscan |
| GO:0005524 | Molecular Function | ATP binding | Interproscan |
| GO:0006281 | Biological Process | DNA repair | Interproscan |
| GO:0006310 | Biological Process | DNA recombination | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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