Gene detail

Detailed information of CAI8027896.1 in Geodia barretti Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
CAI8027896.1	ADHESION G-PROTEIN COUPLED RECEPTOR V1	contig_310_pilon	1100	13771	+

Gene Structure

More details in Jbrowse Sequence

CDS

CAI8027896.1

IVAACVVSFNQDSYTADEGGTFQVMVTIDPMCSIENDVIVSISSINGTAVGGSDFVPVAQMLMFTDATPTLSFSELMYSVVEGNQLTFEVVFESPLTLARDVEVNVTLIDGTAIAPDDYNMLGPMVLTLTGSGGTAMVNIVDDALAEVDEMFEMMLSSNDPSVSIVEDTATVTINDSVLVFQFNQSAYTVDEGDSVPVWTTPLVQRGTLHSTVPQILGVVVITVPGDKLKEDPEDFILSLESKFRLSVSQAALTISDTTVTLDVVGDSEVTEGENITLNITAVGPFVENFMVNIQADPANKVMISPTYVDFTSSTTQSQGVEVNNSVTLTCWFIAGNPVEIVWMKDGVPLSEELASTSDQNPMSSIGAVGVISCSIISCGQVSILFDIDNDNATRISLNTTTADVDETLGTVETTSEATITTLGRVHEGMSQSCNVTYGRVVLREEIFNYTLENVAINVDVRAENLTLPNRTGGDSFVVGDDVVLNCSATNPHGVDRDLTIRWFRLARLSTQEGDYIMPNNPPANTMVETGDGYVALILPDIKDNSDEETVYICKAYNRLPNDQVDEAVNVTVICCEVNFDQTSYTVDEGGTFEVMVTIVPMGSIENDVIVNISSADGTAVGGNDFVPVAQMLTFNNSIRQIPVSVEILNDTVVEDQEVLTLTLVNNDDNVTLPDRLVEVSITDRSSVTVEFDKTGYVVAEGESKNVVLRVNGGTLERDVDVQLTVGGGATEGADYTALPASVVLTAGTTSSTVTFTAANDTLVEGEEIVQLTLGSSDTTVTVGPNSSVAIRDTTITLSFSELMYSVVEGNNLTFEVVVEPPLTVAREVEVTVMLIDGTAIAPDDYMPGPIVLTLTGSGGTAMVNIVNDTLLEVDEMFEMMLSSNDPSVLIVEDTATVTINDSVLVFQFNHSAYTVDEGDSVPVMVTWVNPQMGEVEVRVTVTPSGTLDYYSISPEGNITLNSTSNTSVVVITVPGDKLKEDPEDFILSLESKFRLSVSQAALTISDTTVTLDVVGDSEVTEGENITLNITAVGPFVENFMVNIQADPADKVMISPTFVNFTSTTTQVSVTIGGVLDEVPEGNETVTIIFTTTSANVQDFDYNVTVVDATVNHTDGPQSQGVEVNNSVTLTCWFIAGNPVEIVWMKDGVPLSEGGPNVDEGEFVYRSTLSIAHVEFSNCGNYTCSMRNVTSPPAELGVYQLASTSDQNPMSSIGAVGVISCSIISCGQVSILFDIDNDNATRISLNTTTADVDETLGTVETTSEATITTLGRVHEGMSQSCNVTYGRVVLREEIFNYTLENVAINVDVRAENLTLPNRTGGDSFVVGDDVVLNCSATNPHGVDRDLTIRWFRLARLSTQEGDYIMPNNPPANTMVETGDGYVALILPDIKDNSDEETVYICKAYNRLPNDQVDEAVNVTVISGPVVRFPDDVVTINVGDTEMLECNTAGSNPMATNITITVRRPGEANVTVGTMAGATTRLGFDITGNLSLNGSVYNCAAVNEVGPTSMSFTLVVRDVPGEVDSRNISSVPLTLLVLNVTSLAPISNNAEITNYTVTVCITATDDCLSYLTLQPHAAVLTVPTVTYNVSVRATNVVGSSNSDTTTIVGTNQGAAPIVTGFALSPAFLILEWTLSPLVFNVTDPPNNDLPAESVFFVEEFVIRFEGDVIARIAETSYLVRIPDGQIDPADGSDDTMLPFEVEVIYSDININTTLNTTSFISVAVPNVEEVADINRTPLQTPVTTSGGFSFQWAPPAQVDDNQEFIEVYNVVIDQLPQQGGRGKRQVATNVVNVNQPRTDTDFQFTGGQPFTDYNVSVDAVLNVNGDTTRVTALSPNTIKTEEGKASAPQNPGVTEIEVTTVRVVWGAPVNPNGIISKYRVRVQLTDGSEAMTQDTTVGSSSHYEVYAVITGQLPDTSVILSEQTDTSYVTFAGRASSGLSQQITVGTGVPGDVTLANGQQVNYDNRRVSLGANYYFFVRLYSSQDTTRFSDSEPVPPPVGEQRSV

Transcript

Protein

CAI8027896.1

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00041	fn3	Fibronectin type III domain	Domain	Interproscan
PF03160	Calx-beta	Calx-beta domain	Domain	Interproscan
PF13927	Ig_3	Immunoglobulin domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR003598	Domain	Immunoglobulin subtype 2	Interproscan
IPR003599	Domain	Immunoglobulin subtype	Interproscan
IPR003644	Domain	Na-Ca exchanger/integrin-beta4	Interproscan
IPR003961	Domain	Fibronectin type III	Interproscan
IPR007110	Domain	Immunoglobulin-like domain	Interproscan
IPR013783	Homologous_superfamily	Immunoglobulin-like fold	Interproscan
IPR026919	Family	Adhesion G-protein coupled receptor V1	Interproscan
IPR036116	Homologous_superfamily	Fibronectin type III superfamily	Interproscan
IPR036179	Homologous_superfamily	Immunoglobulin-like domain superfamily	Interproscan
IPR038081	Homologous_superfamily	CalX-like domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46682	ADHESION G-PROTEIN COUPLED RECEPTOR V1	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004930	Molecular Function	G protein-coupled receptor activity	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0007154	Biological Process	cell communication	Interproscan
GO:0007194	Biological Process	negative regulation of adenylate cyclase activity	Interproscan
GO:0016020	Cellular Component	membrane	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-