| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| CAI8026386.1 | 30S 40S RIBOSOMAL PROTEIN | contig_2907_pilon | 6372 | 7393 | + |
| CDS | |||||
| CAI8026386.1 | |||||
| Transcript |
| - |
| Protein |
| CAI8026386.1 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00163 | Ribosomal_S4 | Ribosomal protein S4/S9 N-terminal domain | Family | Interproscan |
| PF00411 | Ribosomal_S11 | Ribosomal protein S11 | Family | Interproscan |
| PF01479 | S4 | S4 domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR001912 | Domain | Small ribosomal subunit protein uS4, N-terminal | Interproscan |
| IPR001971 | Family | Small ribosomal subunit protein uS11 | Interproscan |
| IPR002942 | Domain | RNA-binding S4 domain | Interproscan |
| IPR005709 | Family | Small ribosomal subunit protein uS4, bacterial-type | Interproscan |
| IPR022801 | Family | Small ribosomal subunit protein uS4 | Interproscan |
| IPR036967 | Homologous_superfamily | Small ribosomal subunit protein uS11 superfamily | Interproscan |
| IPR036986 | Homologous_superfamily | RNA-binding S4 domain superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR11831 | 30S 40S RIBOSOMAL PROTEIN | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0003723 | Molecular Function | RNA binding | Interproscan |
| GO:0003735 | Molecular Function | structural constituent of ribosome | Interproscan |
| GO:0005840 | Cellular Component | ribosome | Interproscan |
| GO:0006412 | Biological Process | translation | Interproscan |
| GO:0015935 | Cellular Component | small ribosomal subunit | Interproscan |
| GO:0019843 | Molecular Function | rRNA binding | Interproscan |
| GO:0042274 | Biological Process | ribosomal small subunit biogenesis | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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