| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| CAI8025480.1 | E3 UBIQUITIN-PROTEIN LIGASE MIB2 | contig_2750_pilon | 4002 | 83930 | + |
| CDS | |||||
| CAI8025480.1 | |||||
| Transcript |
| - |
| Protein |
| CAI8025480.1 |
| Gene family | Subfamily |
|---|---|
| Ubiquitin Family | E3|E3 activity RING|RING |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00569 | ZZ | Zinc finger, ZZ type | Domain | Interproscan |
| PF06701 | MIB_HERC2 | Mib_herc2 | Domain | Interproscan |
| PF12796 | Ank_2 | Ankyrin repeats (3 copies) | Repeat | Interproscan |
| PF13606 | Ank_3 | Ankyrin repeat | Repeat | Interproscan |
| PF13920 | zf-C3HC4_3 | Zinc finger, C3HC4 type (RING finger) | Domain | Interproscan |
| PF18346 | SH3_15 | Mind bomb SH3 repeat domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR000433 | Domain | Zinc finger, ZZ-type | Interproscan |
| IPR001841 | Domain | Zinc finger, RING-type | Interproscan |
| IPR002110 | Repeat | Ankyrin repeat | Interproscan |
| IPR010606 | Domain | Mib-herc2 | Interproscan |
| IPR013083 | Homologous_superfamily | Zinc finger, RING/FYVE/PHD-type | Interproscan |
| IPR017907 | Conserved_site | Zinc finger, RING-type, conserved site | Interproscan |
| IPR036770 | Homologous_superfamily | Ankyrin repeat-containing domain superfamily | Interproscan |
| IPR037252 | Homologous_superfamily | Mib/herc2 domain superfamily | Interproscan |
| IPR040847 | Domain | Mind bomb, SH3 repeat domain | Interproscan |
| IPR043145 | Homologous_superfamily | Zinc finger, ZZ-type superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR24202 | E3 UBIQUITIN-PROTEIN LIGASE MIB2 | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0004842 | Molecular Function | ubiquitin-protein transferase activity | Interproscan |
| GO:0005515 | Molecular Function | protein binding | Interproscan |
| GO:0005737 | Cellular Component | cytoplasm | Interproscan |
| GO:0008270 | Molecular Function | zinc ion binding | Interproscan |
| GO:0016567 | Biological Process | protein ubiquitination | Interproscan |
| GO:0046872 | Molecular Function | metal ion binding | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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