Gene detail

Detailed information of CAI8021497.1 in Geodia barretti Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
CAI8021497.1	VILLIN	contig_2156_pilon	49955	64307	+

Gene Structure

More details in Jbrowse Sequence

CDS

CAI8021497.1

MPVGKRKRLDICRECKHANRPAIMAARLGHAGCLATAYRELGVFNERDDFGATPIHFAARNGHLECLKWLVTRSGVSPNAVARNGATAAHDAAAMGHLACLHYLLENTACSSKDATVEGATALHMACRFGRLKVVKWLMDYTGASPGEKGANDVTPVHLCAAKNHLECLQWLTRHHLYMANEKTVHGATAVYFAAQEGCVECLHWLMNHASGDPHMMAEDGMSPIHAAAQAGHIPCLTFLKSIGVSVRQPAEDGATPAHFAAASGQVETLEWILDNGGSALDKDNLGGTPVHDAAEQGQVNTLTALIQRGVPTHQEDYEGLKPLDLAKDNQHNECVQLLFKTISPSLLTSMTPRHSMTRASAADNQQQRRAAELEKQREFESALMTGVSEQRREAMWSNAQQQAVAGPQPGLKMLLDGDVGASPSTFSLDRDPLCRPAPAPPSSTRSRHSTNRRAPSSAKTIDDMDMTSYKPRPVLSPSLFEGPPALSRDNSDVPSADHQSNTKKAKTEVEVDKPQEVSGMEPKPVRTEQRLSVAKETTHKASPIPKRAKFLRKFSKKGGKKKQQLPPVPAKKKEVESVVEEKMEREVEEKMEEGGREDVTAAGRELSLDTQQHVKEMKLAAMEAGTYTGGWEGRLSGSESGPYDMISEDLVQGALKDSLAAARGEIQLPPIKPSTPSPPPSPTLPTIPVLQPPQLPVEKHGPVKEKAVITKEKARKSLKTPDETVTVNFIPQSNIKKSFPVTHVRLLKEEDLSSPGESEDEATTRVDSSGFEKLDLQTFEEFGDNTSENYNEKKGEGEEKEVVGEEEREKREEEGKEAGKDEEEEEREAGEGEEGQGEQGNNSTEIEIEKKGTEEANDGEDETEKEGGTEGEETKGREELSHFKEVDTKTSEDMISTKNPVQRAASLDTMKPLELPPLKKWGDIQNLKQADELVEGDAELKIVLEEEEEEEEERGSEEGGRKLSVVPEENEDEDETYTKLSEHLTLTVESGASPNSSKQPDSREGDGSETEVLNRVTRMERERGSASGKGGVMVGEGVRRKGLDRVKIGSVSEKLKMFGGGRKVTRTVSDSSTKITTSSDTVRAATNGGGDETVEDGIAPLPIIEKRALRSNSEEKLRMDGLPSLSPPQQRANKTRSISSPPASPPLGRLQEGDETETTDGVARVSPTPSPAQLRRKSSTGVFSPLMISTDASSNRSKSENLEKIVETEPHLSQLVTPTSKTLEASIRDEKRWSVRDDRARRQLFALSAEGKVGSRESAYMGWASPPQLTQMKQRWEKEAGESVKKRVASLLRTPRLTGPQVPLEFRGLQPHEPGRLTVWRQKTGSLRKIMSPETINFEETDIFIFLKEPLHGPILHQVYLWLGRQASELSVSSVHQHCQQLMHCLPGGCPLHKEVQGHESGGFMSAIGAGVASKLAGSTPYVNASLETATLYNLNETFMTFQPMLTRPPSHSDLTTSPTPSVLDTHNRVWVWLPAGYWGNQTTRCSNYQKSVLDIGQVFLVQKGYPKWAPITVLTQHCETLQFVSLFTAWPNLNFDLAPPTFQPILKNLNLLELITPTVLTNPSDMKIYRVEGNERRPLPPVPSSHLSAGGVYMFQWTTCHASPLYTWVETSLCVWVGSRVADYWTAVESCTKHVEKEMPLMLVPSGQEPLQLLSFFKGTMVVHSSPYSSPHPSPLLSSPHRGTSSPGHQTTRLYQVSGSSLEHIKAMEVPPSSSSLCSTHCYILSSPPLLFSWSGHLSSEETRTGALYMAQILSSSQKPLLVAEGQEEEDFWKSLGGKKSYQHFDHQKFPNWSVPELYCCISSQSSLTFTQLPPAKKKDLKSNGCYILWLRNQLFVWIGGHWKNGSFTAVLKAYLSQCHSGRTARDFVVTVAHEGREGEGFWQWFELQRCLEPKAIDSSQDIPVVRASKEDETSKEAIPIVTTPTKDEAAPTGSGDLSESGEKVKGEGEGEGEEENGGERGEKGEDSSDEPVKDPSPPPTIFTEEATPTTEQETSVVETPTDLTTAVLAEAAVEKTDDGDNAEGGGAAEPGHVTPPTNQIAEDESMENLSLSSLLTQPEDLEEMVASKQKKRTKKASIKATKTVTVNVEVEGGRVITVTVREGAPVISVMFQVAKTAGLTLTPTSSLFEIVPQLRLQRLLEEHEVMKTVSSQWPTGKHRPRLLLTSFHSKNMLWETNPPIPQSSITAYLGSETFPELTNELFYSPRATRLQWKTTLFKLTTGGIYITSVSGVSQLYASLEHHLYTPTPTATISTPTRFCFALRPVSSWKLKDVKLFCCTDLQTMATWVHGMRLLQHGKQLRVNLQAMRLRLQKRATSNT

Transcript

Protein

CAI8021497.1

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF12796	Ank_2	Ankyrin repeats (3 copies)	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002110	Repeat	Ankyrin repeat	Interproscan
IPR002328	Conserved_site	Alcohol dehydrogenase, zinc-type, conserved site	Interproscan
IPR007122	Family	Villin/Gelsolin	Interproscan
IPR011993	Homologous_superfamily	PH-like domain superfamily	Interproscan
IPR029006	Homologous_superfamily	ADF-H/Gelsolin-like domain superfamily	Interproscan
IPR029071	Homologous_superfamily	Ubiquitin-like domain superfamily	Interproscan
IPR036770	Homologous_superfamily	Ankyrin repeat-containing domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11977	VILLIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0005546	Molecular Function	phosphatidylinositol-4,5-bisphosphate binding	Interproscan
GO:0008270	Molecular Function	zinc ion binding	Interproscan
GO:0016491	Molecular Function	oxidoreductase activity	Interproscan
GO:0051014	Biological Process	actin filament severing	Interproscan
GO:0051015	Molecular Function	actin filament binding	Interproscan
GO:0051016	Biological Process	barbed-end actin filament capping	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-