Detailed information of CAI8021328.1 in Geodia barretti Gene info
Gene IDAnnotationScaffoldStartEndStrand
CAI8021328.1PERIPLASMIC BINDING COMPONENT OF ABC TRANSPORTERcontig_2112_pilon991612898-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00404Dockerin_1Dockerin type I domainDomainInterproscan
PF00496SBP_bac_5Bacterial extracellular solute-binding proteins, family 5 MiddleDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000914DomainSolute-binding protein family 5 domainInterproscan
IPR002105RepeatDockerin type I repeatInterproscan
IPR016134DomainDockerin domainInterproscan
IPR018247Binding_siteEF-Hand 1, calcium-binding siteInterproscan
IPR036439Homologous_superfamilyDockerin domain superfamilyInterproscan
IPR039424FamilySolute-binding protein family 5Interproscan

PANTHER
PANTHER termDescriptionSource
PTHR30290PERIPLASMIC BINDING COMPONENT OF ABC TRANSPORTERInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000272Biological Processpolysaccharide catabolic processInterproscan
GO:0004553Molecular Functionhydrolase activity, hydrolyzing O-glycosyl compoundsInterproscan
GO:0015833Biological Processpeptide transportInterproscan
GO:0030288Cellular Componentouter membrane-bounded periplasmic spaceInterproscan
GO:1904680Molecular Functionpeptide transmembrane transporter activityInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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