Detailed information of CAI8020360.1 in Geodia barretti Gene info
Gene IDAnnotationScaffoldStartEndStrand
CAI8020360.14-HYDROXY-3-METHYLBUT-2-ENYL DIPHOSPHATE REDUCTASEcontig_197_pilon2392226108-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02401LYTBLytB proteinFamilyInterproscan
PF04055Radical_SAMRadical SAM superfamilyDomainInterproscan
PF11946DUF3463Domain of unknown function (DUF3463)FamilyInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR003451Family4-hydroxy-3-methylbut-2-enyl diphosphate reductaseInterproscan
IPR007197DomainRadical SAMInterproscan
IPR013785Homologous_superfamilyAldolase-type TIM barrelInterproscan
IPR017833FamilyHopanoid biosynthesis associated radical SAM protein HpnHInterproscan
IPR022563DomainDomain of unknown function DUF3463Interproscan

PANTHER
PANTHER termDescriptionSource
PTHR304264-HYDROXY-3-METHYLBUT-2-ENYL DIPHOSPHATE REDUCTASEInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0003824Molecular Functioncatalytic activityInterproscan
GO:0019288Biological Processisopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathwayInterproscan
GO:0046872Molecular Functionmetal ion bindingInterproscan
GO:0050992Biological Processdimethylallyl diphosphate biosynthetic processInterproscan
GO:0051536Molecular Functioniron-sulfur cluster bindingInterproscan
GO:0051745Molecular Function4-hydroxy-3-methylbut-2-enyl diphosphate reductase activityInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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