| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| CAI8015886.1 | 23S RRNA METHYLTRANSFERASE | contig_15708_pilon | 19737 | 22112 | + |
| CDS | |||||
| CAI8015886.1 | |||||
| Transcript |
| - |
| Protein |
| CAI8015886.1 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF01048 | PNP_UDP_1 | Phosphorylase superfamily | Domain | Interproscan |
| PF04055 | Radical_SAM | Radical SAM superfamily | Domain | Interproscan |
| PF21016 | RlmN_N | Ribosomal RNA large subunit methyltransferase N-terminal domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR000845 | Domain | Nucleoside phosphorylase domain | Interproscan |
| IPR007197 | Domain | Radical SAM | Interproscan |
| IPR010044 | Family | Methylthioadenosine phosphorylase (MTAP) | Interproscan |
| IPR013785 | Homologous_superfamily | Aldolase-type TIM barrel | Interproscan |
| IPR027492 | Family | Dual-specificity RNA methyltransferase RlmN | Interproscan |
| IPR035994 | Homologous_superfamily | Nucleoside phosphorylase superfamily | Interproscan |
| IPR040072 | Family | Methyltransferase (Class A) | Interproscan |
| IPR048641 | Domain | Dual-specificity RNA methyltransferase RlmN, N-terminal domain | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR30544 | 23S RRNA METHYLTRANSFERASE | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0003824 | Molecular Function | catalytic activity | Interproscan |
| GO:0009116 | Biological Process | nucleoside metabolic process | Interproscan |
| GO:0017061 | Molecular Function | S-methyl-5-thioadenosine phosphorylase activity | Interproscan |
| GO:0030488 | Biological Process | tRNA methylation | Interproscan |
| GO:0051536 | Molecular Function | iron-sulfur cluster binding | Interproscan |
| GO:0070475 | Biological Process | rRNA base methylation | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-Yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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