Detailed information of CAI8015224.1 in Geodia barretti Gene info
Gene IDAnnotationScaffoldStartEndStrand
CAI8015224.1ANKYRIN REPEAT PROTEINcontig_15506_pilon891720269+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
Ubiquitin FamilyUBD|Other|Beta-prp
Ubiquitin FamilyE3|E3 adaptor Cullin RING|CDC20
Ubiquitin FamilyE3|E3 adaptor Cullin RING|DWD

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00023AnkAnkyrin repeatRepeatInterproscan
PF12796Ank_2Ankyrin repeats (3 copies)RepeatInterproscan
PF12894ANAPC4_WD40Anaphase-promoting complex subunit 4 WD40 domainRepeatInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR001680RepeatWD40 repeatInterproscan
IPR002110RepeatAnkyrin repeatInterproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR024977DomainAnaphase-promoting complex subunit 4-like, WD40 domainInterproscan
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR036770Homologous_superfamilyAnkyrin repeat-containing domain superfamilyInterproscan
IPR050663FamilyAnkyrin Repeat and SOCS BoxInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR24193ANKYRIN REPEAT PROTEINInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000976Molecular Functiontranscription cis-regulatory region bindingInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0045944Biological Processpositive regulation of transcription by RNA polymerase IIInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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