| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| CAI8013886.1 | SOLEUCYL-TRNA SYNTHETASE | contig_1494_pilon | 12531 | 16476 | + |
| CDS | |||||
| CAI8013886.1 | |||||
| Transcript |
| - |
| Protein |
| CAI8013886.1 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00133 | tRNA-synt_1 | tRNA synthetases class I (I, L, M and V) | Domain | Interproscan |
| PF01149 | Fapy_DNA_glyco | Formamidopyrimidine-DNA glycosylase N-terminal domain | Domain | Interproscan |
| PF06827 | zf-FPG_IleRS | Zinc finger found in FPG and IleRS | Domain | Interproscan |
| PF06831 | H2TH | Formamidopyrimidine-DNA glycosylase H2TH domain | Domain | Interproscan |
| PF19302 | DUF5915 | Domain of unknown function (DUF5915) | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR000214 | Domain | Zinc finger, DNA glycosylase/AP lyase-type | Interproscan |
| IPR002300 | Domain | Aminoacyl-tRNA synthetase, class Ia | Interproscan |
| IPR002301 | Family | Isoleucine-tRNA ligase | Interproscan |
| IPR009008 | Homologous_superfamily | Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain | Interproscan |
| IPR009080 | Homologous_superfamily | Aminoacyl-tRNA synthetase, class Ia, anticodon-binding | Interproscan |
| IPR010663 | Domain | Zinc finger, FPG/IleRS-type | Interproscan |
| IPR010979 | Homologous_superfamily | Small ribosomal subunit protein uS13-like, H2TH | Interproscan |
| IPR012319 | Domain | Formamidopyrimidine-DNA glycosylase, catalytic domain | Interproscan |
| IPR014729 | Homologous_superfamily | Rossmann-like alpha/beta/alpha sandwich fold | Interproscan |
| IPR015886 | Domain | DNA glycosylase/AP lyase, H2TH DNA-binding | Interproscan |
| IPR015887 | Binding_site | DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site | Interproscan |
| IPR020629 | Family | Formamidopyrimidine-DNA glycosylase | Interproscan |
| IPR023586 | Family | Isoleucine-tRNA ligase, type 2 | Interproscan |
| IPR035937 | Homologous_superfamily | MutM-like, N-terminal | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR42780 | SOLEUCYL-TRNA SYNTHETASE | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0000166 | Molecular Function | nucleotide binding | Interproscan |
| GO:0002161 | Molecular Function | aminoacyl-tRNA editing activity | Interproscan |
| GO:0003676 | Molecular Function | nucleic acid binding | Interproscan |
| GO:0003677 | Molecular Function | DNA binding | Interproscan |
| GO:0003684 | Molecular Function | damaged DNA binding | Interproscan |
| GO:0003906 | Molecular Function | DNA-(apurinic or apyrimidinic site) endonuclease activity | Interproscan |
| GO:0004812 | Molecular Function | aminoacyl-tRNA ligase activity | Interproscan |
| GO:0004822 | Molecular Function | isoleucine-tRNA ligase activity | Interproscan |
| GO:0005524 | Molecular Function | ATP binding | Interproscan |
| GO:0006281 | Biological Process | DNA repair | Interproscan |
| GO:0006284 | Biological Process | base-excision repair | Interproscan |
| GO:0006418 | Biological Process | tRNA aminoacylation for protein translation | Interproscan |
| GO:0006428 | Biological Process | isoleucyl-tRNA aminoacylation | Interproscan |
| GO:0008270 | Molecular Function | zinc ion binding | Interproscan |
| GO:0008534 | Molecular Function | oxidized purine nucleobase lesion DNA N-glycosylase activity | Interproscan |
| GO:0016799 | Molecular Function | hydrolase activity, hydrolyzing N-glycosyl compounds | Interproscan |
| GO:0019104 | Molecular Function | DNA N-glycosylase activity | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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