| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| CAI8013784.1 | LYSINE-SPECIFIC DEMETHYLASE | contig_1489_pilon | 33781 | 40293 | + |
| CDS | |||||
| CAI8013784.1 | |||||
| Transcript |
| - |
| Protein |
| CAI8013784.1 |
| Gene family | Subfamily |
|---|---|
| Ubiquitin Family | E3|E3 activity RING|PHD |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF02373 | JmjC | JmjC domain, hydroxylase | Domain | Interproscan |
| PF13831 | PHD_2 | PHD-finger | Family | Interproscan |
| PF13832 | zf-HC5HC2H_2 | PHD-zinc-finger like domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR001965 | Domain | Zinc finger, PHD-type | Interproscan |
| IPR003347 | Domain | JmjC domain | Interproscan |
| IPR011011 | Homologous_superfamily | Zinc finger, FYVE/PHD-type | Interproscan |
| IPR013083 | Homologous_superfamily | Zinc finger, RING/FYVE/PHD-type | Interproscan |
| IPR034732 | Domain | Extended PHD (ePHD) domain | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR10694 | LYSINE-SPECIFIC DEMETHYLASE | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0000785 | Cellular Component | chromatin | Interproscan |
| GO:0005634 | Cellular Component | nucleus | Interproscan |
| GO:0006338 | Biological Process | chromatin remodeling | Interproscan |
| GO:0010468 | Biological Process | regulation of gene expression | Interproscan |
| GO:0032452 | Molecular Function | histone demethylase activity | Interproscan |
| GO:0032454 | Molecular Function | histone H3K9 demethylase activity | Interproscan |
| GO:0051864 | Molecular Function | histone H3K36 demethylase activity | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
© 2024 All Rights Reserved.
