Detailed information of CAI8012239.1 in Geodia barretti Gene info
Gene IDAnnotationScaffoldStartEndStrand
CAI8012239.1EXODEOXYRIBONUCLEASE 7 LARGE SUBUNITcontig_14357_pilon4622240-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01132EFPElongation factor P (EF-P) OB domainDomainInterproscan
PF02601Exonuc_VII_LExonuclease VII, large subunitFamilyInterproscan
PF08207EFP_NElongation factor P (EF-P) KOW-like domainDomainInterproscan
PF13742tRNA_anti_2OB-fold nucleic acid binding domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR001059DomainTranslation elongation factor P/YeiP, centralInterproscan
IPR003753FamilyExonuclease VII, large subunitInterproscan
IPR008991Homologous_superfamilyTranslation protein SH3-like domain superfamilyInterproscan
IPR011768FamilyTranslation elongation factor PInterproscan
IPR012340Homologous_superfamilyNucleic acid-binding, OB-foldInterproscan
IPR013185DomainTranslation elongation factor, KOW-likeInterproscan
IPR013852Conserved_siteTranslation elongation factor P/YeiP, conserved siteInterproscan
IPR014722Homologous_superfamilyLarge ribosomal subunit protein uL2, domain 2Interproscan
IPR015365DomainElongation factor P, C-terminalInterproscan
IPR020579DomainExonuclease VII, large subunit, C-terminalInterproscan
IPR025824DomainOB-fold nucleic acid binding domainInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR30008EXODEOXYRIBONUCLEASE 7 LARGE SUBUNITInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0003746Molecular Functiontranslation elongation factor activityInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0006308Biological ProcessDNA catabolic processInterproscan
GO:0006414Biological Processtranslational elongationInterproscan
GO:0008855Molecular Functionexodeoxyribonuclease VII activityInterproscan
GO:0009318Cellular Componentexodeoxyribonuclease VII complexInterproscan
GO:0043043Biological Processpeptide biosynthetic processInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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