Detailed information of CAI8012005.1 in Geodia barretti Gene info
Gene IDAnnotationScaffoldStartEndStrand
CAI8012005.1SIGNAL RECOGNITION PARTICLE 54K PROTEIN SRP54contig_141_pilon2121923618-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00044Gp_dh_NGlyceraldehyde 3-phosphate dehydrogenase, NAD binding domainDomainInterproscan
PF00448SRP54SRP54-type protein, GTPase domainDomainInterproscan
PF02800Gp_dh_CGlyceraldehyde 3-phosphate dehydrogenase, C-terminal domainDomainInterproscan
PF02881SRP54_NSRP54-type protein, helical bundle domainDomainInterproscan
PF02978SRP_SPBSignal peptide binding domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000897DomainSignal recognition particle, SRP54 subunit, GTPase domainInterproscan
IPR003593DomainAAA+ ATPase domainInterproscan
IPR004125DomainSignal recognition particle, SRP54 subunit, M-domainInterproscan
IPR004780FamilySignal recognition particle proteinInterproscan
IPR013822DomainSignal recognition particle SRP54, helical bundleInterproscan
IPR020828DomainGlyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domainInterproscan
IPR020829DomainGlyceraldehyde 3-phosphate dehydrogenase, catalytic domainInterproscan
IPR020830Active_siteGlyceraldehyde 3-phosphate dehydrogenase, active siteInterproscan
IPR020831FamilyGlyceraldehyde/Erythrose phosphate dehydrogenase familyInterproscan
IPR022941FamilySignal recognition particle, SRP54 subunitInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR036291Homologous_superfamilyNAD(P)-binding domain superfamilyInterproscan
IPR036891Homologous_superfamilySignal recognition particle, SRP54 subunit, M-domain superfamilyInterproscan
IPR042101Homologous_superfamilySignal recognition particle SRP54, N-terminal domain superfamilyInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR11564SIGNAL RECOGNITION PARTICLE 54K PROTEIN SRP54Interproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0003924Molecular FunctionGTPase activityInterproscan
GO:0005525Molecular FunctionGTP bindingInterproscan
GO:0006614Biological ProcessSRP-dependent cotranslational protein targeting to membraneInterproscan
GO:0008312Molecular Function7S RNA bindingInterproscan
GO:0016620Molecular Functionoxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptorInterproscan
GO:0016887Molecular FunctionATP hydrolysis activityInterproscan
GO:0048500Cellular Componentsignal recognition particleInterproscan
GO:0051287Molecular FunctionNAD bindingInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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