Detailed information of CAI8010101.1 in Geodia barretti Gene info
Gene IDAnnotationScaffoldStartEndStrand
CAI8010101.1WD40 REPEAT PROTEINcontig_1370_pilon2023121823-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
Ubiquitin FamilyUBD|Other|Beta-prp
Ubiquitin FamilyE3|E3 adaptor Cullin RING|CDC20
Ubiquitin FamilyE3|E3 adaptor Cullin RING|DWD

Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00400WD40WD domain, G-beta repeatRepeatInterproscan
PF00404Dockerin_1Dockerin type I domainDomainInterproscan
PF13860FlgD_igFlgD Ig-like domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR001680RepeatWD40 repeatInterproscan
IPR002105RepeatDockerin type I repeatInterproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR016134DomainDockerin domainInterproscan
IPR018247Binding_siteEF-Hand 1, calcium-binding siteInterproscan
IPR019775Conserved_siteWD40 repeat, conserved siteInterproscan
IPR020472RepeatG-protein beta WD-40 repeatInterproscan
IPR025965DomainFlgD/Vpr, Ig-like domainInterproscan
IPR026444DomainSecretion system C-terminal sorting domainInterproscan
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR036439Homologous_superfamilyDockerin domain superfamilyInterproscan
IPR051983FamilyWD repeat and SOCS box domain-containing proteinInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR15622WD40 REPEAT PROTEINInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000209Biological Processprotein polyubiquitinationInterproscan
GO:0000272Biological Processpolysaccharide catabolic processInterproscan
GO:0004553Molecular Functionhydrolase activity, hydrolyzing O-glycosyl compoundsInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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