| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| CAI8008020.1 | 30S RIBOSOMAL PROTEIN | contig_1299_pilon | 39265 | 39861 | - |
| CDS | |||||
| CAI8008020.1 | |||||
| Transcript |
| - |
| Protein |
| CAI8008020.1 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF02482 | Ribosomal_S30AE | Sigma 54 modulation protein / S30EA ribosomal protein | Family | Interproscan |
| PF16321 | Ribosom_S30AE_C | Sigma 54 modulation/S30EA ribosomal protein C terminus | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR003489 | Family | Ribosome hibernation promoting factor/RaiA | Interproscan |
| IPR032528 | Domain | Sigma 54 modulation/S30EA ribosomal protein, C-terminal | Interproscan |
| IPR034694 | Family | Ribosome hibernation promoting factor, long/plastid | Interproscan |
| IPR036567 | Homologous_superfamily | Ribosome hibernation promotion factor-like | Interproscan |
| IPR038416 | Homologous_superfamily | Sigma 54 modulation/S30EA ribosomal protein, C-terminal domain superfamily | Interproscan |
| IPR050574 | Family | HPF/YfiA ribosome-associated | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR33231 | 30S RIBOSOMAL PROTEIN | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0022627 | Cellular Component | cytosolic small ribosomal subunit | Interproscan |
| GO:0043024 | Molecular Function | ribosomal small subunit binding | Interproscan |
| GO:0044238 | Biological Process | primary metabolic process | Interproscan |
| GO:0045900 | Biological Process | negative regulation of translational elongation | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-Yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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