| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| CAI8004901.1 | TRANSCRIPTION TERMINATION FACTOR NUSA | contig_12126_pilon | 3375 | 4823 | + |
| CDS | |||||
| CAI8004901.1 | |||||
| Transcript |
| - |
| Protein |
| CAI8004901.1 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00575 | S1 | S1 RNA binding domain | Domain | Interproscan |
| PF08529 | NusA_N | NusA N-terminal domain | Domain | Interproscan |
| PF13184 | KH_5 | NusA-like KH domain | Domain | Interproscan |
| PF14520 | HHH_5 | Helix-hairpin-helix domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR003029 | Domain | S1 domain | Interproscan |
| IPR004087 | Domain | K Homology domain | Interproscan |
| IPR009019 | Homologous_superfamily | K homology domain superfamily, prokaryotic type | Interproscan |
| IPR010213 | Domain | Transcription termination factor NusA | Interproscan |
| IPR010995 | Homologous_superfamily | DNA repair Rad51/transcription factor NusA, alpha-helical | Interproscan |
| IPR012340 | Homologous_superfamily | Nucleic acid-binding, OB-fold | Interproscan |
| IPR013735 | Domain | Transcription factor NusA, N-terminal | Interproscan |
| IPR015946 | Homologous_superfamily | K homology domain-like, alpha/beta | Interproscan |
| IPR025249 | Domain | KH domain, NusA-like | Interproscan |
| IPR030842 | Family | Transcription termination/antitermination protein NusA, bacterial | Interproscan |
| IPR036555 | Homologous_superfamily | NusA, N-terminal domain superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR22648 | TRANSCRIPTION TERMINATION FACTOR NUSA | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0000166 | Molecular Function | nucleotide binding | Interproscan |
| GO:0003676 | Molecular Function | nucleic acid binding | Interproscan |
| GO:0003700 | Molecular Function | DNA-binding transcription factor activity | Interproscan |
| GO:0003723 | Molecular Function | RNA binding | Interproscan |
| GO:0005829 | Cellular Component | cytosol | Interproscan |
| GO:0006353 | Biological Process | DNA-templated transcription termination | Interproscan |
| GO:0031554 | Biological Process | regulation of termination of DNA-templated transcription | Interproscan |
| GO:0031564 | Biological Process | transcription antitermination | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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