| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| CAI8003852.1 | SMALL RIBOSOMAL SUBUNIT BIOGENESIS GTPASE RSGA | contig_12031_pilon | 31542 | 32904 | - |
| CDS | |||||
| CAI8003852.1 | |||||
| Transcript |
| - |
| Protein |
| CAI8003852.1 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF01261 | AP_endonuc_2 | Xylose isomerase-like TIM barrel | Domain | Interproscan |
| PF03193 | RsgA_GTPase | RsgA GTPase | Domain | Interproscan |
| PF16745 | RsgA_N | RsgA N-terminal domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR004881 | Family | Ribosome biogenesis GTPase RsgA | Interproscan |
| IPR010914 | Domain | RsgA GTPase domain | Interproscan |
| IPR012340 | Homologous_superfamily | Nucleic acid-binding, OB-fold | Interproscan |
| IPR013022 | Domain | Xylose isomerase-like, TIM barrel domain | Interproscan |
| IPR027417 | Homologous_superfamily | P-loop containing nucleoside triphosphate hydrolase | Interproscan |
| IPR031944 | Domain | Ribosome biogenesis GTPase RsgA, N-terminal | Interproscan |
| IPR036237 | Homologous_superfamily | Xylose isomerase-like superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR32120 | SMALL RIBOSOMAL SUBUNIT BIOGENESIS GTPASE RSGA | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0003924 | Molecular Function | GTPase activity | Interproscan |
| GO:0005525 | Molecular Function | GTP binding | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-Yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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