| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| CAI8002122.1 | PRIMOSOMAL PROTEIN N | contig_11653_pilon | 57963 | 60458 | + |
| CDS | |||||
| CAI8002122.1 | |||||
| Transcript |
| - |
| Protein |
| CAI8002122.1 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00270 | DEAD | DEAD/DEAH box helicase | Domain | Interproscan |
| PF00271 | Helicase_C | Helicase conserved C-terminal domain | Domain | Interproscan |
| PF17764 | PriA_3primeBD | 3'DNA-binding domain (3'BD) | Domain | Interproscan |
| PF18074 | PriA_C | Primosomal protein N C-terminal domain | Domain | Interproscan |
| PF18319 | PriA_CRR | PriA DNA helicase Cys-rich region (CRR) domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR001650 | Domain | Helicase, C-terminal domain-like | Interproscan |
| IPR005259 | Family | Primosomal protein N' | Interproscan |
| IPR011545 | Domain | DEAD/DEAH box helicase domain | Interproscan |
| IPR014001 | Domain | Helicase superfamily 1/2, ATP-binding domain | Interproscan |
| IPR027417 | Homologous_superfamily | P-loop containing nucleoside triphosphate hydrolase | Interproscan |
| IPR036390 | Homologous_superfamily | Winged helix DNA-binding domain superfamily | Interproscan |
| IPR040498 | Domain | PriA DNA helicase, Cys-rich region (CRR) domain | Interproscan |
| IPR041222 | Domain | Primosomal protein N', 3' DNA-binding domain | Interproscan |
| IPR041236 | Domain | Primosomal protein N, C-terminal domain | Interproscan |
| IPR042115 | Homologous_superfamily | Primosomal protein N', 3' DNA-binding domain superfamily | Interproscan |
| IPR050880 | Family | Primosomal protein N' helicase | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR30580 | PRIMOSOMAL PROTEIN N | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0003676 | Molecular Function | nucleic acid binding | Interproscan |
| GO:0003677 | Molecular Function | DNA binding | Interproscan |
| GO:0003678 | Molecular Function | DNA helicase activity | Interproscan |
| GO:0005524 | Molecular Function | ATP binding | Interproscan |
| GO:0006260 | Biological Process | DNA replication | Interproscan |
| GO:0006268 | Biological Process | DNA unwinding involved in DNA replication | Interproscan |
| GO:0006270 | Biological Process | DNA replication initiation | Interproscan |
| GO:0006302 | Biological Process | double-strand break repair | Interproscan |
| GO:0006310 | Biological Process | DNA recombination | Interproscan |
| GO:0032508 | Biological Process | DNA duplex unwinding | Interproscan |
| GO:0043138 | Molecular Function | 3'-5' DNA helicase activity | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-Yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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