| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| CAI7995115.1 | WD REPEAT-CONTAINING PROTEIN POP1 | contig_10844_pilon | 118913 | 123469 | + |
| CDS | |||||
| CAI7995115.1 | |||||
| Transcript |
| - |
| Protein |
| CAI7995115.1 |
| Gene family | Subfamily |
|---|---|
| Ubiquitin Family | UBD|Other|Beta-prp |
| Ubiquitin Family | E3|E3 adaptor Cullin RING|CDC20 |
| Ubiquitin Family | E3|E3 adaptor Cullin RING|DWD |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00294 | PfkB | pfkB family carbohydrate kinase | Domain | Interproscan |
| PF00400 | WD40 | WD domain, G-beta repeat | Repeat | Interproscan |
| PF00404 | Dockerin_1 | Dockerin type I domain | Domain | Interproscan |
| PF13860 | FlgD_ig | FlgD Ig-like domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR001680 | Repeat | WD40 repeat | Interproscan |
| IPR002105 | Repeat | Dockerin type I repeat | Interproscan |
| IPR002173 | Conserved_site | Carbohydrate/purine kinase, PfkB, conserved site | Interproscan |
| IPR011611 | Domain | Carbohydrate kinase PfkB | Interproscan |
| IPR015943 | Homologous_superfamily | WD40/YVTN repeat-like-containing domain superfamily | Interproscan |
| IPR016134 | Domain | Dockerin domain | Interproscan |
| IPR018247 | Binding_site | EF-Hand 1, calcium-binding site | Interproscan |
| IPR019775 | Conserved_site | WD40 repeat, conserved site | Interproscan |
| IPR020472 | Repeat | G-protein beta WD-40 repeat | Interproscan |
| IPR025965 | Domain | FlgD/Vpr, Ig-like domain | Interproscan |
| IPR026444 | Domain | Secretion system C-terminal sorting domain | Interproscan |
| IPR029056 | Homologous_superfamily | Ribokinase-like | Interproscan |
| IPR036322 | Homologous_superfamily | WD40-repeat-containing domain superfamily | Interproscan |
| IPR036439 | Homologous_superfamily | Dockerin domain superfamily | Interproscan |
| IPR050349 | Family | WD repeat LIS1/nudF dynein regulation | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR44129 | WD REPEAT-CONTAINING PROTEIN POP1 | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0000272 | Biological Process | polysaccharide catabolic process | Interproscan |
| GO:0004553 | Molecular Function | hydrolase activity, hydrolyzing O-glycosyl compounds | Interproscan |
| GO:0005515 | Molecular Function | protein binding | Interproscan |
| GO:0016301 | Molecular Function | kinase activity | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-Yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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