Detailed information of CAI7995023.1 in Geodia barretti Gene info
Gene IDAnnotationScaffoldStartEndStrand
CAI7995023.1TRANSCRIPTIONAL REGULATORY PROTEINcontig_10844_pilon1802819011+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00158Sigma54_activatSigma-54 interaction domainDomainInterproscan
PF02954HTH_8Bacterial regulatory protein, Fis familyDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR002078DomainRNA polymerase sigma factor 54 interaction domainInterproscan
IPR002197DomainDNA binding HTH domain, Fis-typeInterproscan
IPR009057Homologous_superfamilyHomeobox-like domain superfamilyInterproscan
IPR025662Binding_siteSigma-54 interaction domain, ATP-binding site 1Interproscan
IPR025943Binding_siteSigma-54 interaction domain, ATP-binding site 2Interproscan
IPR025944Conserved_siteSigma-54 interaction domain, conserved siteInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR32071TRANSCRIPTIONAL REGULATORY PROTEINInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0008134Molecular Functiontranscription factor bindingInterproscan
GO:0043565Molecular Functionsequence-specific DNA bindingInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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