Detailed information of CAI7989560.1 in Geodia barretti Gene info
Gene IDAnnotationScaffoldStartEndStrand
CAI7989560.1ALANYL-TRNA EDITING PROTEINcontig_10101_pilon127342128070-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01411tRNA-synt_2ctRNA synthetases class II (A)FamilyInterproscan
PF07973tRNA_SADThreonyl and Alanyl tRNA synthetase second additional domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR009000Homologous_superfamilyTranslation protein, beta-barrel domain superfamilyInterproscan
IPR012947DomainThreonyl/alanyl tRNA synthetase, SADInterproscan
IPR018163Homologous_superfamilyThreonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamilyInterproscan
IPR018164DomainAlanyl-tRNA synthetase, class IIc, N-terminalInterproscan
IPR018165DomainAlanyl-tRNA synthetase, class IIc, core domainInterproscan
IPR051335FamilyAlanyl-tRNA Editing EnzymesInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR43462ALANYL-TRNA EDITING PROTEINInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0000166Molecular Functionnucleotide bindingInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0004812Molecular Functionaminoacyl-tRNA ligase activityInterproscan
GO:0004813Molecular Functionalanine-tRNA ligase activityInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0006419Biological Processalanyl-tRNA aminoacylationInterproscan
GO:0043039Biological ProcesstRNA aminoacylationInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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TOP