Detailed information of CAI7989470.1 in Geodia barretti Gene info
Gene IDAnnotationScaffoldStartEndStrand
CAI7989470.154S RIBOSOMAL PROTEIN L1, MITOCHONDRIALcontig_10101_pilon9360394764+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00687Ribosomal_L1Ribosomal protein L1p/L10e familyDomainInterproscan
PF03946Ribosomal_L11_NRibosomal protein L11, N-terminal domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR000911FamilyRibosomal protein uL11Interproscan
IPR005878FamilyLarge ribosomal subunit protein uL1, bacterial-typeInterproscan
IPR016095Homologous_superfamilyLarge ribosomal subunit protein uL1, 3-layer alpha/beta-sandwich domainInterproscan
IPR020784DomainLarge ribosomal subunit protein uL11, N-terminalInterproscan
IPR023673Conserved_siteLarge ribosomal subunit protein uL1, conserved siteInterproscan
IPR023674Homologous_superfamilyRibosomal protein uL1-likeInterproscan
IPR028364FamilyRibosomal protein uL1/ribosomal biogenesis proteinInterproscan
IPR036769Homologous_superfamilyLarge ribosomal subunit protein uL11, C-terminal domain superfamilyInterproscan
IPR036796Homologous_superfamilyLarge ribosomal subunit protein uL11, N-terminal domain superfamilyInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR3642754S RIBOSOMAL PROTEIN L1, MITOCHONDRIALInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0003735Molecular Functionstructural constituent of ribosomeInterproscan
GO:0005840Cellular ComponentribosomeInterproscan
GO:0006412Biological ProcesstranslationInterproscan
GO:0015934Cellular Componentlarge ribosomal subunitInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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