| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| CAI7989414.1 | SERINE HYDROXYMETHYLTRANSFERASE | contig_10101_pilon | 41515 | 42420 | - |
| CDS | |||||
| CAI7989414.1 | |||||
| Transcript |
| - |
| Protein |
| CAI7989414.1 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00464 | SHMT | Serine hydroxymethyltransferase | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR001085 | Family | Serine hydroxymethyltransferase | Interproscan |
| IPR015421 | Homologous_superfamily | Pyridoxal phosphate-dependent transferase, major domain | Interproscan |
| IPR015422 | Homologous_superfamily | Pyridoxal phosphate-dependent transferase, small domain | Interproscan |
| IPR015424 | Homologous_superfamily | Pyridoxal phosphate-dependent transferase | Interproscan |
| IPR019798 | Binding_site | Serine hydroxymethyltransferase, pyridoxal phosphate binding site | Interproscan |
| IPR039429 | Domain | Serine hydroxymethyltransferase-like domain | Interproscan |
| IPR049943 | Family | Serine hydroxymethyltransferase-like | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR11680 | SERINE HYDROXYMETHYLTRANSFERASE | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0004372 | Molecular Function | glycine hydroxymethyltransferase activity | Interproscan |
| GO:0005737 | Cellular Component | cytoplasm | Interproscan |
| GO:0005829 | Cellular Component | cytosol | Interproscan |
| GO:0006565 | Biological Process | L-serine catabolic process | Interproscan |
| GO:0006730 | Biological Process | one-carbon metabolic process | Interproscan |
| GO:0008270 | Molecular Function | zinc ion binding | Interproscan |
| GO:0019264 | Biological Process | glycine biosynthetic process from serine | Interproscan |
| GO:0030170 | Molecular Function | pyridoxal phosphate binding | Interproscan |
| GO:0035999 | Biological Process | tetrahydrofolate interconversion | Interproscan |
| GO:0046653 | Biological Process | tetrahydrofolate metabolic process | Interproscan |
| GO:0046655 | Biological Process | folic acid metabolic process | Interproscan |
| GO:0050897 | Molecular Function | cobalt ion binding | Interproscan |
| GO:0070905 | Molecular Function | serine binding | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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