| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| CAI7988923.1 | PEPTIDOGLYCAN D,D-TRANSPEPTIDASE | contig_10047_pilon | 44314 | 46230 | - |
| CDS | |||||
| CAI7988923.1 | |||||
| Transcript |
| - |
| Protein |
| CAI7988923.1 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00905 | Transpeptidase | Penicillin binding protein transpeptidase domain | Domain | Interproscan |
| PF03717 | PBP_dimer | Penicillin-binding Protein dimerisation domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR001460 | Domain | Penicillin-binding protein, transpeptidase | Interproscan |
| IPR005311 | Domain | Penicillin-binding protein, dimerisation domain | Interproscan |
| IPR005543 | Domain | PASTA domain | Interproscan |
| IPR012338 | Homologous_superfamily | Beta-lactamase/transpeptidase-like | Interproscan |
| IPR036138 | Homologous_superfamily | Penicillin-binding protein, dimerisation domain superfamily | Interproscan |
| IPR050515 | Family | Bacterial Transpeptidases and Beta-Lactamases | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR30627 | PEPTIDOGLYCAN D,D-TRANSPEPTIDASE | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0005887 | Cellular Component | plasma membrane | Interproscan |
| GO:0008658 | Molecular Function | penicillin binding | Interproscan |
| GO:0071555 | Biological Process | cell wall organization | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| - | - | - | - | - | - |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
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