Detailed information of CAI7988919.1 in Geodia barretti Gene info
Gene IDAnnotationScaffoldStartEndStrand
CAI7988919.1UDP-N-ACETYLMURAMOYL-TRIPEPTIDE--D-ALANYL-D-ALANINE LIGASEcontig_10047_pilon4135342750-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02875Mur_ligase_CMur ligase family, glutamate ligase domainDomainInterproscan
PF08245Mur_ligase_MMur ligase middle domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR004101DomainMur ligase, C-terminalInterproscan
IPR005863FamilyUDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligaseInterproscan
IPR013221DomainMur ligase, centralInterproscan
IPR035911Homologous_superfamilyMurE/MurF, N-terminalInterproscan
IPR036565Homologous_superfamilyMur-like, catalytic domain superfamilyInterproscan
IPR036615Homologous_superfamilyMur ligase, C-terminal domain superfamilyInterproscan
IPR051046FamilyMurCDEF Family: Cell Wall and Coenzyme F430 SynthesisInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR43024UDP-N-ACETYLMURAMOYL-TRIPEPTIDE--D-ALANYL-D-ALANINE LIGASEInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0009058Biological Processbiosynthetic processInterproscan
GO:0016881Molecular Functionacid-amino acid ligase activityInterproscan
GO:0047480Molecular FunctionUDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activityInterproscan
GO:0071555Biological Processcell wall organizationInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
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