| Gene ID | Annotation | Scaffold | Start | End | Strand |
|---|---|---|---|---|---|
| Bpl_scaf_920-2.16 | EUKARYOTIC TRANSLATION INITIATION FACTOR 2 SUBUNIT 1 | Bpl_scaf_920 | 205771 | 222819 | - |
| CDS | |||||
| Bpl_scaf_920-2.16 | |||||
| Transcript |
| Bpl_scaf_920-2.16 |
| Protein |
| Bpl_scaf_920-2.16 |
| Gene family | Subfamily |
|---|---|
| - | - |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00575 | S1 | S1 RNA binding domain | Domain | Interproscan |
| PF07541 | EIF_2_alpha | Eukaryotic translation initiation factor 2 alpha subunit | Family | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR003029 | Domain | S1 domain | Interproscan |
| IPR011488 | Family | Translation initiation factor 2, alpha subunit | Interproscan |
| IPR012340 | Homologous_superfamily | Nucleic acid-binding, OB-fold | Interproscan |
| IPR024054 | Homologous_superfamily | Translation initiation factor 2, alpha subunit, middle domain superfamily | Interproscan |
| IPR024055 | Homologous_superfamily | Translation initiation factor 2, alpha subunit, C-terminal | Interproscan |
| IPR044126 | Domain | IF2a, S1-like domain | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR10602 | EUKARYOTIC TRANSLATION INITIATION FACTOR 2 SUBUNIT 1 | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0003676 | Molecular Function | nucleic acid binding | Interproscan |
| GO:0003723 | Molecular Function | RNA binding | Interproscan |
| GO:0003743 | Molecular Function | translation initiation factor activity | Interproscan |
| GO:0005850 | Cellular Component | eukaryotic translation initiation factor 2 complex | Interproscan |
| GO:0006413 | Biological Process | translational initiation | Interproscan |
| GO:0033290 | Cellular Component | eukaryotic 48S preinitiation complex | Interproscan |
| GO:0043022 | Molecular Function | ribosome binding | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K03237 | EIF2S1; translation initiation factor 2 subunit 1 | - | RNA transport | ko03013 | PMID: 28812709 |
| Protein processing in endoplasmic reticulum | ko04141 | PMID: 28812709 | |||
| Autophagy - animal | ko04140 | PMID: 28812709 | |||
| Autophagy - yeast | ko04138 | PMID: 28812709 | |||
| Apoptosis | ko04210 | PMID: 28812709 | |||
| Non-alcoholic fatty liver disease (NAFLD) | ko04932 | PMID: 28812709 | |||
| Measles | ko05162 | PMID: 28812709 | |||
| Influenza A | ko05164 | PMID: 28812709 | |||
| Hepatitis C | ko05160 | PMID: 28812709 | |||
| Herpes simplex infection | ko05168 | PMID: 28812709 |
| 1. Expression trend for Bpl_scaf_920-2.16 global RNA-seq network |
Maintained by Dr. Jiajie She in Longjun Wu's Lab & Pei-Yuan Qian's Lab and supported by Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou) & The Hong Kong University of Science and Technology
© 2024 All Rights Reserved.
