Detailed information of Bpl_scaf_7423-6.3 in Gigantidas platifrons Gene info
Gene IDAnnotationScaffoldStartEndStrand
Bpl_scaf_7423-6.3DNA POLYMERASE TYPE-X FAMILY MEMBERBpl_scaf_7423633757646260-

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00533BRCTBRCA1 C Terminus (BRCT) domainFamilyInterproscan
PF10391DNA_pol_lambd_fFingers domain of DNA polymerase lambdaDomainInterproscan
PF14716HHH_8Helix-hairpin-helix domainDomainInterproscan
PF14792DNA_pol_B_palmDNA polymerase beta palm DomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR001357DomainBRCT domainInterproscan
IPR002054DomainDNA-directed DNA polymerase XInterproscan
IPR010996DomainDNA polymerase beta-like, N-terminal domainInterproscan
IPR018944DomainDNA polymerase lambda, fingers domainInterproscan
IPR019843Binding_siteDNA polymerase family X, binding siteInterproscan
IPR022312FamilyDNA polymerase family XInterproscan
IPR027421Homologous_superfamilyDNA polymerase lambda lyase domain superfamilyInterproscan
IPR028207DomainDNA polymerase beta, palm domainInterproscan
IPR036420Homologous_superfamilyBRCT domain superfamilyInterproscan
IPR043519Homologous_superfamilyNucleotidyltransferase superfamilyInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR11276DNA POLYMERASE TYPE-X FAMILY MEMBERInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0003887Molecular FunctionDNA-directed DNA polymerase activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006281Biological ProcessDNA repairInterproscan
GO:0006303Biological Processdouble-strand break repair via nonhomologous end joiningInterproscan
GO:0016779Molecular Functionnucleotidyltransferase activityInterproscan
GO:0034061Molecular FunctionDNA polymerase activityInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K03512POLL; DNA polymerase lambdaEC:2.7.7.7
EC:4.2.99.-
Base excision repair ko03410PMID: 28812709
Non-homologous end-joining ko03450PMID: 28812709

Expression pattern
 1. Expression trend for Bpl_scaf_7423-6.3 global RNA-seq network
TOP