Detailed information of Bpl_scaf_7318-6.6 in Gigantidas platifrons Gene info
Gene IDAnnotationScaffoldStartEndStrand
Bpl_scaf_7318-6.6DNA LIGASEBpl_scaf_7318654793672906+

Gene Structure
More details in Jbrowse Sequence
CDS
Transcript
Protein

Gene family
Gene familySubfamily
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Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00644PARPPoly(ADP-ribose) polymerase catalytic domainFamilyInterproscan
PF02877PARP_regPoly(ADP-ribose) polymerase, regulatory domainDomainInterproscan
PF05406WGRWGR domainDomainInterproscan

InterPro
InterPro termTypeDescriptionSource
IPR004102DomainPoly(ADP-ribose) polymerase, regulatory domainInterproscan
IPR008893DomainWGR domainInterproscan
IPR012317DomainPoly(ADP-ribose) polymerase, catalytic domainInterproscan
IPR036616Homologous_superfamilyPoly(ADP-ribose) polymerase, regulatory domain superfamilyInterproscan
IPR036930Homologous_superfamilyWGR domain superfamilyInterproscan
IPR050800FamilyADP-ribosyltransferase diphtheria toxin-likeInterproscan

PANTHER
PANTHER termDescriptionSource
PTHR10459DNA LIGASEInterproscan

Gene Ontology
GO termsCategoryDescriptionSource
GO:0003950Molecular FunctionNAD+-protein poly-ADP-ribosyltransferase activityInterproscan
GO:0005730Cellular ComponentnucleolusInterproscan
GO:0006302Biological Processdouble-strand break repairInterproscan
GO:0035861Cellular Componentsite of double-strand breakInterproscan
GO:0070212Biological Processprotein poly-ADP-ribosylationInterproscan
GO:1990404Molecular FunctionNAD+-protein ADP-ribosyltransferase activityInterproscan

KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K10798PARP; poly [ADP-ribose] polymeraseEC:2.4.2.30
Base excision repair ko03410PMID: 28812709
Apoptosis ko04210PMID: 28812709
Apoptosis - fly ko04214PMID: 28812709
Necroptosis ko04217PMID: 28812709
Longevity regulating pathway - worm ko04212PMID: 28812709

Expression pattern
 1. Expression trend for Bpl_scaf_7318-6.6 global RNA-seq network
TOP