Gene detail

Detailed information of Bpl_scaf_65436-4.20 in Gigantidas platifrons Gene info

Gene ID	Annotation	Scaffold	Start	End	Strand
Bpl_scaf_65436-4.20	GDAP1, ISOFORM A	Bpl_scaf_65436	474530	485052	+

Gene Structure

More details in Jbrowse Sequence

CDS

Transcript

Bpl_scaf_65436-4.20

TTTTACCCCTTGCACGATTTATTGACATTGGAAAGTCAAGATGTCCGAGCACGATAATAACTTGACCCTTTTCTATTATTATGCATCGTATTATTCCCAAAAGGCTTTACTTGCACTGTTTGAGAAAGATTGCAAATTTGAAAAAAAAATTATCAACATTCAATTAGGAGAACAAAATGAACCGGAATATATGCGGATGAATCCAAATGGATTGGTTCCAATGTTGAAAGATGGACAGAAAATTGTTGTAGAATCTGAAAAAATTGTTGACTACATTGACAGCAAAGTGAAATCTGATGTGACGTTGATACCCGATGAAAGTACTCCAATTGGGAAAGAGGCTAAAAGATTACGACAAATGTTGGATGTAATAAAGATAGATGTGGCTACATATGGAGTGGTGTATAATGAGGAATTTTCTGTCACTGGTGTAAAATTACCAAAACCATTGGTAAATAGAATGAGAGCTGCCACTAGTGGGCAAGAAGTTTGGGTGGTAGGTCCACAATTTACAGTAGTTGATATTCATGTCGTTATTTTCATGGATCGCATGACCTTGTTGGGCCTGGAAGATAGATTTTTCTCTAAAGAGAAGAGACCATTACTTCATGATTATCGTCAGCGGATTGGTCAAAGGAAAAGTGTACAGATGCTTAGAGCTGAAGTAAAGAAAGCATTTGCACAGTTTCTGTGGACGAAGGTTAAATCGGTCATTCCATACGTAGCAGGTGCTACTACTCTAGGCGTGGCTGTAGGTCTGGGTATTTGGTTCCTCAAAAACAAGTAAAATGTTGTATTATATACAGTAAATCCCCTCATAAAAGGCCACTCTTATCAGAGGCTACCCTCTTATAGACAGACCAAATTTCAGATGTACTGAAAAAGTAAAATAATACTAAACTGACCCCTCAAGAGTGGCATACTCTCATATCATGTCCACTTTTTCATTGCCATAGGGTGGCCTTATAAGAGGAGTAACCACTGTATTCTATTCCAGGATAATTAGATTAGTGTAATTTACATATATAAATATCATAAACAGGATTAATGTTTAAATACTACCAGTAGCATGTAAAATGGCTAAACATGTAAGATAGGTGAGGATGTCTAGAATTAACATTACTTCTTTGATTGAGTAAGTGATTGTTGTTTAAAGCCAAGTGAGAAAATTCTCAGCCATATCATGGTGAGAACAATTTACATTTCAATGAGATGATGATGATGTCTGCTTTGTTCTAGACCTACACACTTAGATGAATTTTTATAGTGCTCTCTCACTGAAACAACAGTCAGCAGGTAGACATGTCGCTCCACTCGGACACATTATCCTGATTCCGAGCCAGCATATTTTTGATCATACTCCTTAATGCTGCGTGCTCAGCGGAGAAGCAGCAGATTCCAATTTTATTGTCTTTGGTTTAGCATCATATAACGTGATAAGATTGTTACTGGTGTATATTTCTTCGGTTGTTAATTACGAAATGTATTGTTTTGTGTGTTTCTTCAGTTAAAACAGTAGTGTAAACCAAATAAAATAGCTATGGTTTTTTACGCCACTTTTAACAATATTTCAGTTTTATGGTGGCAATTAGTTTTATTGGTGGAGGAATCAAAATTATCCGGAGAAAACCACAGACCTGCCGCAAGTCACTGACAAACTTTTTCACATAACGTTGTATCCCCCCCCCAATAAAATGAGTGTTCCAATATCATTTGTGAATTTCATCAAACATGTAGCAGACAATCTTTTATTTATGTTATATACTTTCAAAACATATATAAGGACTCGTAAAAACTTGGAACAAAGGAATAACTTTGTGAGAATGTCTCTCATTTTGGTAATCCTTATTTTTATTTCAATTTATTGCTATTTCTCTTAAAATTTGTAAGAGACATGCTTAACCATATTTTAATTTTAAATCTCCACATTAGCTGAGACCCCCCCCCTTCCCATTGATTGCTGATGTTAGAGTATCACATACATCCATCACTAGGGACCATTTACAAATTATTTAAAAAAAATTTACACTAGTGCTTAAGGCAGCAATTATTTCATGGTTGTTATCCATATTTTTTTTTTGCTTGTAA

Protein

Gene family

Gene family	Subfamily
-	-

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13417	GST_N_3	Glutathione S-transferase, N-terminal domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR004045	Domain	Glutathione S-transferase, N-terminal	Interproscan
IPR036249	Homologous_superfamily	Thioredoxin-like superfamily	Interproscan
IPR036282	Homologous_superfamily	Glutathione S-transferase, C-terminal domain superfamily	Interproscan
IPR040079	Family	Glutathione transferase family	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR44188	GDAP1, ISOFORM A	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000266	Biological Process	mitochondrial fission	Interproscan
GO:0006626	Biological Process	protein targeting to mitochondrion	Interproscan
GO:0008053	Biological Process	mitochondrial fusion	Interproscan
GO:0031307	Cellular Component	obsolete integral component of mitochondrial outer membrane	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
-	-	-	-	-	-

Expression pattern

1. Expression trend for Bpl_scaf_65436-4.20 global RNA-seq network